Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq6 118 2e-21
seq465 87.8 4e-12
>seq6
Length=114070
Score = 118 bits (130), Expect = 2e-21
Identities = 119/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| ||||||||||| ||||| || |||||||| || || | ||||| ||||| ||||||
Sbjct 15238 GTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCTCTTTCGCGTCCATCTTCTGG 15297
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | ||| | |||| ||||| |||| |||||| ||| |||| || | |||
Sbjct 15298 CTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCCAACGAGCTCATCTCCCGTGAC 15357
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
|| || | || ||||||||||||| |||| ||
Sbjct 15358 GAGGGCATGCACACCGACTTTGCATGCCTGCTCTT 15392
>seq465
Length=132516
Score = 87.8 bits (96), Expect = 4e-12
Identities = 168/248 (68%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| ||||||||||| | || | ||| || || || || ||||| || |||
Sbjct 113632 CCGCCAGCGGTCTTGGAGATCAACGCACACGTCTTCAGTGTGTCGTAGATACCGTCGATG 113691
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAA 94911
|| || || | | | | | |||||||| || || | || || || |||||
Sbjct 113692 CTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCGCG 113751
Query 94912 TTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCA 94971
|| ||||| || || || ||||| || || || | ||||||| || || || |||
Sbjct 113752 TTGAACAGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAGTCGTAGGTCTCA 113811
Query 94972 ATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGA 95031
||| | | |||||| || || ||||| || || |||||||| | ||||| |||
Sbjct 113812 ATGGCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGT 113871
Query 95032 GGGCGCTC 95039
||||||||
Sbjct 113872 GGGCGCTC 113879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989578028169805
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |