Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq465 232 1e-55
seq6 105 1e-17
>seq465
Length=132516
Score = 232 bits (256), Expect = 1e-55
Identities = 1140/1784 (64%), Gaps = 63/1784 (4%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
|||||||| |||||||| || |||| | ||||| || |||||||| || || || | |
Sbjct 112117 GTGAATTGGATGGGAGCAGAGGCGGCCATGGTACGAAGGTAGTACATGCCGGTCTTCAAA 112176
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837
||||| |||| ||| ||||||||| || | || | || || ||
Sbjct 112177 CCGAGCTTCCAGCCGGCGAAATGCATGGAAGTGATCTTACCCATGGTGGGCTCCTTCATG 112236
Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897
||||| |||| || ||| ||||||||||||||| || | ||| |||||||| | |||
Sbjct 112237 TGGATGTTCAATGACTGAGATTGATCGATGAAGGCACCGCGGTCAGCAGCCATCTGGATG 112296
Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957
|| || || | |||||||| | || || |||| ||| | |||||||| | |
Sbjct 112297 ATGGTACGCTGCGAGATTTCCCATACGGTCTTGTAAAGGGTCTTGGTCTCTTCTGGGATG 112356
Query 78958 TTTGT-AT--TCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014
|| | || |||| ||||| ||||||||||| || || | ||||| || | ||| |
Sbjct 112357 TTGGGGATCCTCTGGATGGAACCACCATCTGCAATGATACGGTTCTTCATGTTCTCAGAC 112416
Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074
|| | | ||| | | | ||||| || || || || || || || |||
Sbjct 112417 CAGAGACCCATGTCGACGAGGTCCTTGAGGAGCCAAGGGTTGACGACCTGGAACTCACCA 112476
Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134
| || || | || | ||| || || ||| ||||| || | | || || |||||
Sbjct 112477 GCCAGCACACGACGTGAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGTTTCCA 112536
Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194
| ||| || | ||| || || || ||||| || || |||| | | || | | |||
Sbjct 112537 AGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAACCAGGAGAGAGTTGCGCACACCA 112596
Query 79195 TA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATT 79253
| ||| | ||| || || || | || |||| |||||||| ||||| || ||
Sbjct 112597 TGCTGAGC-GATCTTGTCCTTCAACGAAGCCCAGTCCCAAAGGTCAGAAGGAGTCACGCC 112655
Query 79254 CCAAAGATCATATTGTAGAATACCGTT----ACTAGCGTATGATCCTGTGTATGTTTCAT 79309
||| ||||| || || || ||| || || ||| | || |||||| |||
Sbjct 112656 CCAGAGATCGTACTGAAGCTGACCCTTGGACACAGGCGAACCCTC----GTATGTAGCAT 112711
Query 79310 AAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369
| || || || | ||| | || || || | | || ||| ||||| || |
Sbjct 112712 ATGGACCAAGCTCCTTGGCGATATCGCAGGACGACGTGAGAGCCGCGTGGTAAATTGTCT 112771
Query 79370 CGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTA-TCAAATGGATAATTTAAGAG 79427
|||| |||| | ||||| | |||| ||||| || | | ||||| || | | |
Sbjct 112772 CGAAGATCTGGGTGTTGAGCTTCTTG-GCTTC-AGTCGACTCAAAAGGCAGACGAAGGGC 112829
Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487
| || || || || | || |||||||||| |||||| || ||||| | ||
Sbjct 112830 GAGGAAAGCATCAGCAAGACCCTGAACACCAAGACCGATGGGCCTATGGCG-------GA 112882
Query 79488 AATTTCAGCTTCTGGAAT-------AGGATAATAATTAATATCTATAATTTTATTGAGAT 79540
|||| | || | | | ||| || | || | || || || || ||||| |
Sbjct 112883 AATTGCTGCGGCGTGCCTCCTCCACAGGGTAGTGGTTGACCTCGATGATCTTGTTGAGGT 112942
Query 79541 TCC---TGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-TCGTC---CA 79593
| | |||| | | || ||| || | || ||| | || || || ||| | |
Sbjct 112943 TACGTGTGACGACCA---TGGTCACCTCGTGGAGCTTGTGGAAGTCGAACTCGCCACGCT 112999
Query 79594 TCTATT--ACAAAC-ATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTA 79650
| || | ||||| ||| | |||| || ||||| || || ||||| ||||||| |
Sbjct 113000 TGTAGTCGACAAAGGATGGA-AGGGCGAGGGAAGCCAGGTTGCACACGGCGACCTCATCA 113058
Query 79651 GCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTT 79710
| | | | | | | || |||||||||||||| | |||||| || | ||
Sbjct 113059 GGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGGAGCTGCGAATGGTACCGAGGTTC 113118
Query 79711 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCA 79770
| || || ||| |||| || || ||||| || || |||||||| | ||||| |||
Sbjct 113119 TTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGCATGAACGGGTTGCCAGTCTCA 113178
Query 79771 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTC 79830
|||| | || | ||| || | ||||| | || | | | | || || | | |
Sbjct 113179 GTCTGCGCCTCGAGAATGGCGTACCAGA-GCTTCTGGGCACGA--ACAGTCTCGCGACCC 113235
Query 79831 TT-TTCTCTT--TCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCT 79887
|| ||||| ||||| | || || | |||||||| || || | || ||| |
Sbjct 113236 TTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTCGAACTCATCGCCGTAGACGTCGGCA 113295
Query 79888 AATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTC 79947
| ||||| || |||| || ||||| | | |||||| || | || | ||||| |||
Sbjct 113296 AGACCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCGTTCTCTTGCACTCGCTTC 113355
Query 79948 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTT 80007
|| |||||||| |||||||| || || || || || | | || ||| || ||
Sbjct 113356 ATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCACGAGCTCGTACCTCTTCCTTA 113415
Query 80008 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 80067
|| ||||| || || ||||| | | | ||| | ||||| || || | |||
Sbjct 113416 CCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATACATCCGCGTGCCATGGCTCGAGGTAG 113475
Query 80068 ATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 80127
||||| | | | || || || ||||| || |||||||| | ||| | ||||||||| ||
Sbjct 113476 ATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTG 113535
Query 80128 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTT 80187
|| || | | ||| || || | |||||||||||| || ||||| || || |||
Sbjct 113536 TAGACACGGAGCATCGGGATGAGACCATTGGATGTTCCGTTGGTGCCACCAATGTAGGAG 113595
Query 80188 CCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 80245
|| ||||||| || | | |||| || || || || || || | || ||||| |
Sbjct 113596 CCGGTGGCACGGATGCGGTGCACATTG--AGTCCAATGCCGCCAGCGGTCTTGGAGATCA 113653
Query 80246 ATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGT 80304
| || || ||| || | || || ||||| || || ||||| || || |||||| |
Sbjct 113654 ACGCACA-CGTCTTCAGTGTGTCGTAGATACCGTCGATGCTGTCCTCCTTCATGTCGATG 113712
Query 80305 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 80364
|| || ||| ||||| || | |||||||| || || | ||||| || ||
Sbjct 113713 AGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCGCGTTGAACAGCGTAGGCGAGGCA 113772
Query 80365 TGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCTCAATAGCTGATTCTATATCCCA 80423
|| || || | |||| |||| |||| | ||| |||||||| || |||| || |
Sbjct 113773 TGTGTGAAGTACTTTTGCGACATGTAG-TCGTAGGTCTCAATGGC--CTTCTCAATGTCT 113829
Query 80424 TTG--ATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGG 80465
| | ||| || || || ||||||||||| | ||||||||| ||
Sbjct 113830 TCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGTGG 113873
>seq6
Length=114070
Score = 105 bits (116), Expect = 1e-17
Identities = 149/209 (71%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
||||| || ||| ||||| |||||||| | || || |||||||| || || ||
Sbjct 15383 CATGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGA 15324
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| || || ||||| || ||||| || |||||||| || || || ||||||
Sbjct 15323 CCTGGCATCAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAAGAGCCGCTGAAGAAG 15264
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGT--- 50136
|| || || || || |||||||| || || | | || || ||| | | | | |
Sbjct 15263 ATACCCTCAACGGCAGCAAAGGCGACGAGACGGTTGGCAAAAGTGGAGTTCTTGTCTGAG 15204
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTT 50165
|||||||| ||||||| |||||||||||
Sbjct 15203 ATCCACTTGAGAGCCCAGTCGGCCTTCTT 15175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718264571192440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |