Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq6 190 3e-43
seq465 129 9e-25
>seq6
Length=114070
Score = 190 bits (210), Expect = 3e-43
Identities = 583/906 (64%), Gaps = 73/906 (8%)
Strand=Plus/Plus
Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081
||| |||||||||| ||||| | || || || ||||| | ||| ||| | |||||||||
Sbjct 14780 TGGCAAATGTACAAGAAGGCCGAAGCTTCTTTCTGGACCGCCGAGGAGATTGATCTGTCC 14839
Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141
||||| || |||| ||| | | || | | || ||||| || || || |||
Sbjct 14840 AAGGATCTCCACGACTGGAACAAGCGCCTCAACGACGACGAGCGTTTCTTCATCTCCCAC 14899
Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATT 125200
|| | |||||||| |||| ||||||||| ||||||||||| || || || || || ||
Sbjct 14900 GTTCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCAACGAGAACCTCGTCGA-GCGCTT 14958
Query 125201 CTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGA 125260
||| ||| | || ||||||| ||||| ||||| ||||| || ||||| ||
Sbjct 14959 CTCCAGCGAGGTTCAAATACCAGAGGCACGATGCTTCTACGGCTTCCAGATTATGATGGA 15018
Query 125261 GAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC---GCA 125317
|||| | ||||| || | ||||| || || |||| ||||| |||| || |||
Sbjct 15019 GAACATCCACTCAGAGACATACTCGCTCCTCATCGACACATACATCAGCGAGCCAAGGCA 15078
Query 125318 ACGTAAACACATGCTCTTTAACGCAAT----------------------CGACACG---- 125351
|| | | || ||||| ||||| || | |||||
Sbjct 15079 GCGCACATAC---CTCTTCAACGCCATTGACAACAGTAAGTCACTTCCACCACACGCTTG 15135
Query 125352 ------------------------GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATT 125387
|| || | || || || ||||| | |||| |
Sbjct 15136 AAGGAACGTGTCTAACGCGTCATAGTTCCATGCATCCGCAAGAAGGCCGACTGGGCTCTC 15195
Query 125388 CGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTA 125447
||||||| ||| | || || | | ||| || | || || || || || |||||
Sbjct 15196 AAGTGGATCTCAGACAAGAACTCCACTTTTGCCAACCGTCTCGTCGCCTTTGCTGCCGTT 15255
Query 125448 GAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTC 125507
||||| |||||||| || ||| ||| ||||||| ||||||||||||||||| ||
Sbjct 15256 GAGGGTATCTTCTTCAGCGGCTCTTTCGCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTG 15315
Query 125508 ATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGAC 125567
||||| || || || | |||||| | || || || ||||||||| | ||| |||
Sbjct 15316 ATGCCAGGTCTTACCTTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGAC 15375
Query 125568 TTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAG 125627
|||| ||| | ||| | | || ||| || | | | | ||||| | ||
Sbjct 15376 TTTG-CATGC--CTG---CTCTTCTCTCT---TCTCAACACCCGCCCCAGCAAGGATGCC 15426
Query 125628 GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTA 125687
|||| ||| | ||||| || || ||| || || ||||| || |||||| | ||
Sbjct 15427 GTCAAGGCCATCATCACCGAGGCTGTTGAGATTGAGCAGGAGTTCCTCACCGAAGCTCTC 15486
Query 125688 CCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCA 125747
|| | || | |||||||| | || || |||||| ||||||| ||||| || ||
Sbjct 15487 CCCTGCGCTCTGCTCGGCATGAATTCCACCCTCATGTGCCAGTACATCGAGTTCGTCGCT 15546
Query 125748 GATCGTCTACTGTACGAGTTGATTGG---CCGCAAGATTTACAACGCCAAGAATCCCTTT 125804
|| || || |||| | |||| | |||| | |||||||||| || |||||
Sbjct 15547 GACCGCCTGCTGT---TGGCCCTTGGCAACACCAAGGTCTACAACGCCACCAACCCCTTC 15603
Query 125805 GATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGC 125864
|| |||||| | ||| || || | ||| ||||||||||| ||||||||| ||| ||
Sbjct 15604 GACTTCATGGAGAACATCTCGCTCGCGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGC 15663
Query 125865 GAGTAC 125870
|| |||
Sbjct 15664 GATTAC 15669
>seq465
Length=132516
Score = 129 bits (142), Expect = 9e-25
Identities = 322/484 (67%), Gaps = 4/484 (1%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || ||| | ||| ||||| | || || |||||||||||
Sbjct 113510 CAGGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACCTCGAGCCATGGCACGCGGAT 113451
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || | ||| | || | ||||| ||| || ||||||| |||||| | |||
Sbjct 113450 GTATTCGGCTTCCTTGACCTACGCAAGAACCACGGTAAGGAAGAGGTACGAGCTCGTGAC 113391
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
| || || || |||||| | || ||| | ||||||||||| || | || ||| |
Sbjct 113390 CTCTTCTACGCCCTCTGGATTCCCGATCTCTTCATGAAGCGAGTGCAAGAGAACGGCGAG 113331
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||||||| || || || ||||| |||| || ||||| |||||
Sbjct 113330 TGGACACTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACGGCGATGAGTTC 113271
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAGTCGATGCACG 97174
|||| ||||| ||||||| ||| | | || ||||| ||| ||| |
Sbjct 113270 GAGGAGCTCTACACCCGTTACGAGCGCGAGAACAAGGGTCGCGAGACTGTTCG-TGC-CC 113213
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| || ||| | ||||| | ||| ||| |||||||| | |||| ||| || |
Sbjct 113212 AGAAGCTCTGGTACGCCATTCTCGAGGCGCAGACTGAGACTGGCAACCCGTTCATGCTGT 113153
Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
||||||| | || | || |||||| || | || ||||| ||||||
Sbjct 113152 ACAAGGACGCTTGCAACAGGAAGTCCAACCAGAAGAACCTCGGTACCATTCGCAGCTCCA 113093
Query 97294 ATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGG 97353
| || ||||| || ||||| |||| | | |||| || ||| || || ||| ||||
Sbjct 113092 ACCTCTGCACTGAGATTGTCGAGTTCACTGCTCCTGATGAGGTCGCCGTGTGCAACCTGG 113033
Query 97354 CATC 97357
| ||
Sbjct 113032 CTTC 113029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741054837013960
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