Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 >seq6 Length=114070 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||||| || || || || || || || ||||||||| | || || ||||| | Sbjct 15672 CTGGTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGCGAGCGAGATGTTCTC 15613 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | |||| || ||| | | |||| ||| Sbjct 15612 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGACCTTGGTGTTGCCAAGGGCCAACAGCAG 15553 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||| | ||||||| | || ||||||||||| | || || Sbjct 15552 GCGGTCAGCGACGAACTCGATGTACTGGCACATGAGGGTG-GAATTCATGCCGAGCAGAG 15494 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 || || | ||| | ||| | ||| |||| ||||| || || || || Sbjct 15493 CGCAGGGGAGAGCTTCGGTGAGGAACTCCTGCTCAATCTCAACAGCCTC 15445 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384 |||||| || ||| ||| |||||| | |||| ||| ||||| || ||||||||||| Sbjct 14954 GCTCGACGAGGTTCTCGTTGACGATGCCATCGGAGGCGGCGAAGAAGGCGAGAACGTGGG 14895 Query 120385 TAAGAAAAAATCGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACA 120444 | || || || || | ||||| || |||||||| |||| | |||||||||| Sbjct 14894 AGATGAAGAAACGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCGTGGAGATCCTTGGACA 14835 Query 120445 TGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501 || ||||| ||| | ||||| | || | | || ||||||||| |||||||| Sbjct 14834 GATCAATCTCCTCGGCGGTCCAGAAAGAAGCTTCGGCCTTCTTGTACATTTGCCAGA 14778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659581875120