Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 2e-17
>seq6
Length=114070
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| ||||| || || || || || || || ||||||||| | || || ||||| |
Sbjct 15672 CTGGTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGCGAGCGAGATGTTCTC 15613
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | | |||| | |||| || ||| | | |||| |||
Sbjct 15612 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGACCTTGGTGTTGCCAAGGGCCAACAGCAG 15553
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820
|| || || || ||||||||||| | ||||||| | || ||||||||||| | || ||
Sbjct 15552 GCGGTCAGCGACGAACTCGATGTACTGGCACATGAGGGTG-GAATTCATGCCGAGCAGAG 15494
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869
|| || | ||| | ||| | ||| |||| ||||| || || || ||
Sbjct 15493 CGCAGGGGAGAGCTTCGGTGAGGAACTCCTGCTCAATCTCAACAGCCTC 15445
Score = 89.7 bits (98), Expect = 5e-13
Identities = 126/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 120325 GCTCGATGATGTTAGTGTTCACGATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCT 120384
|||||| || ||| ||| |||||| | |||| ||| ||||| || |||||||||||
Sbjct 14954 GCTCGACGAGGTTCTCGTTGACGATGCCATCGGAGGCGGCGAAGAAGGCGAGAACGTGGG 14895
Query 120385 TAAGAAAAAATCGTTCTTTATCGTTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACA 120444
| || || || || | ||||| || |||||||| |||| | ||||||||||
Sbjct 14894 AGATGAAGAAACGCTCGTCGTCGTTGAGGCGCTTGTTCCAGTCGTGGAGATCCTTGGACA 14835
Query 120445 TGTCGATCTCTTCGACTTTCCAGTGACAATCGACCGCTTTCTTGTACGATTGCCAGA 120501
|| ||||| ||| | ||||| | || | | || ||||||||| ||||||||
Sbjct 14834 GATCAATCTCCTCGGCGGTCCAGAAAGAAGCTTCGGCCTTCTTGTACATTTGCCAGA 14778
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478659581875120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |