Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq465 183 3e-41 seq6 152 5e-32 seq113 134 1e-26 seq267 102 8e-17 seq53 91.5 1e-13 >seq465 Length=132516 Score = 183 bits (202), Expect = 3e-41 Identities = 927/1451 (64%), Gaps = 45/1451 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||| || |||| ||||||||| | || | ||| || ||| | || Sbjct 112456 TTGACGACCTGGAACTCACCAGCCAGCACACGACGTGAGTAGATGTTCGAGGTGTATGGC 112515 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| || || || || || | |||| || || |||||| ||| ||| Sbjct 112516 TCGAAGCACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAACC 112575 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||||| || |||| ||| | ||||| | || | |||| ||||| Sbjct 112576 AGGAGAGAGTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACGAAGCCCAGTCCCAA 112635 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATG-CCCTCGCTGGC-GGGGC 145295 || || || ||||| |||| | |||||||| || || |||| | | || | Sbjct 112636 AGGTCAGAAGGAGTCACGCCCCAGAGATCGTACTG-AAGCTGACCCTTGGACACAGGCGA 112694 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAG 145353 ||| | | | | | | || ||||| | ||||||| ||||| || | || Sbjct 112695 ACCCTCGTATGTA---GCATATGGACCAAGCTCCTTGGCGATATCGCAGGACGACGTGAG 112751 Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCA-TCGCTCT 145412 ||| || |||||||||||| || || |||||||| | | |||||| ||| || Sbjct 112752 AGCCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTTGGCTTCAGTCG-ACT 112810 Query 145413 CGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGG 145472 | | |||| || || | |||||||| || || ||||| | || | ||||||| Sbjct 112811 CAAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAACACCAAGACCGATGG 112870 Query 145473 GCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532 ||| ||| | ||||| | ||| ||| | ||| || | || ||||| | Sbjct 112871 GCCTATGGCGGAAATTGCTGCGGCGTGCCTCCTCCACAGGGTAGTGGTTGACCTCGATGA 112930 Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACC 145592 | || || | ||| || || ||| | || | | | | ||| | ||||| || | Sbjct 112931 TCTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCTTGTGGAAGTCGAA-C 112989 Query 145593 GAGCCTCG-TCAACGACCACACAGCTATTG-ACGGCGATCGACGCCAAATTACAAACTGC 145650 ||| || | | | ||| || || | | ||||| || |||| || || || || Sbjct 112990 TCGCCACGCTTGTAGTCGACAAAG-GATGGAAGGGCGAGGGAAGCCAGGTTGCACACGGC 113048 Query 145651 CGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGT 145710 ||| || | | || | | || ||||| | ||| | ||| | ||||| Sbjct 113049 GACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGGAGCTGCGAATGGT 113108 Query 145711 TCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCC 145770 || || || | ||| || ||||||||||| ||||||||||| |||||| |||| Sbjct 113109 ACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGCATGAACGGGTT 113168 Query 145771 GCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAG---TCCTGCGCACGCACCTG 145827 ||||||||| ||||| || ||| || || | || | ||| ||||| || Sbjct 113169 GCCAGTCTCAGTCTGCG---CCTCGAGAATGGCGTACCAGAGCTTCTGGGCACGAACAGT 113225 Query 145828 CTGCTGGTAGCGGCCC-TCTTCT-----TCGTATTTCCTGTAGAGCTCCTCAAACGCGGA 145881 | | ||| ||| | |||| ||||| ||||||||||||| ||| | Sbjct 113226 C------TCGCGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTCGAACTCATC 113279 Query 145882 ACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTT 145941 |||||| |||| || || || |||| |||||| ||||| || | ||| ||||||| Sbjct 113280 GCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCGTT 113339 Query 145942 GGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGC 146001 | | || |||| ||| || | ||| || | ||| || ||||| | | ||| || || Sbjct 113340 CTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCACGAGC 113399 Query 146002 TTTGCAATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGT 146060 | || || ||| ||| | || | | | ||| | | | | ||||||| Sbjct 113400 TCGTACCTCTTCCTTACCGTGGTTCTTGCGT-AGGTCAAGGAAGCCGAATACATCCGCGT 113458 Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGT 146117 |||| || || | |||| ||||| || || || ||||||||||| || |||| Sbjct 113459 GCCATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCTGATCGACGT 113518 Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177 || | ||||||| |||| || | ||| || || || ||| | ||||| | Sbjct 113519 AGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATGTTCCGTTGG 113578 Query 146178 TAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGC 146237 | || || |||| || || | || || ||||| | || | ||||| Sbjct 113579 TGCCACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTGAGTCCAATGCCGCCAG 113638 Query 146238 CGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC- 146295 || |||||| || || || ||| | || || |||||||| ||||| ||||| || Sbjct 113639 CGGTCTTGGAGATCAACGCACACGTCTTC-AGTGTGTCGTAGATACCGTCGATGCTGTCC 113697 Query 146296 -GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGA 146354 |||| ||| ||| || ||||| || ||||||| | | ||||| ||||| || Sbjct 113698 TCCTTC--ATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCGCGTTGA 113755 Query 146355 ACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCAT-CATCCGATACGTTTCGATA 146413 ||| ||| || || || || || ||| | ||| | || || || || || Sbjct 113756 ACAGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAGTCG-TAGGTCTCAATG 113814 Query 146414 GCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGC 146473 || | | |||||| |||||||| ||||| | ||||| |||||||||||||| || || Sbjct 113815 GCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGTGGG 113874 Query 146474 CGCTCCGCCAC 146484 ||||| || || Sbjct 113875 CGCTCTGCAAC 113885 >seq6 Length=114070 Score = 152 bits (168), Expect = 5e-32 Identities = 351/521 (67%), Gaps = 27/521 (5%) Strand=Plus/Plus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAG-CAGCACCGCGAC 46145 || ||| | |||||||| |||||||||| | ||||||||| ||| || | | | || Sbjct 15163 CCATGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCT-CAGACAAGAACTCCAC 15221 Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205 ||| ||| | ||| | || |||||||| || ||||| |||| || ||| ||| Sbjct 15222 TTTTGCCAACCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCTCTTT 15281 Query 46206 TGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264 || ||||||| | |||| || | || | | ||||| || || || || ||||| Sbjct 15282 CGCGTCCATCTTCTGGCTCAAGAAGCGCGGTC-TGATGCCAGGTCTTACCTTCTCCAACG 15340 Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT---CTACTAT---- 46317 |||| || || || ||||||||| |||| || |||||||| || || || || | Sbjct 15341 AGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGCATGCCTGCTCTTCTCTCTTC 15400 Query 46318 --AACACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGG 46375 ||||| ||| | | |||| ||| ||| | ||| ||| |||| Sbjct 15401 TCAACACCCGC---CCCAGCAAGGATGC---------CGTCAAGGCCATCATCACCGAGG 15448 Query 46376 CGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGA 46435 | || | |||||| ||||||| | || | || || ||| || ||||| ||||||| Sbjct 15449 CTGTTGAGATTGAGCAGGAGTTCCTCACCGAAGCTCTCCCCTGCGCTCTGCTCGGCATGA 15508 Query 46436 ACGC-ACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTT 46494 | | || ||| ||||| | ||||||||||| || || ||||| ||||| || ||| Sbjct 15509 ATTCCACCCTCA-TGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTGCTGTTGGCCCTT 15567 Query 46495 CACCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTG 46554 | | | ||| | |||| ||| || || || || ||| | |||||||| || Sbjct 15568 GGCAACACCAAGGTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTC 15627 Query 46555 GAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 | |||||| || || || ||||| |||||||||||||| || Sbjct 15628 GCGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGATTA 15668 >seq113 Length=382967 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||||| |||||||| | ||||| || |||||||| || |||||||| || | Sbjct 361741 CCTCCGCGCAGGCGCAGCACGAGATGTAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAC 361800 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| || |||| || ||||||||||||||||| Sbjct 361801 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGA 361860 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 361861 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATTGTGTCGGATGACTCTACT 361920 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || || || ||||| |||||||| Sbjct 361921 TCAAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 361967 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| || ||||| || || | ||||||||||| ||||||||||| ||| Sbjct 361513 CCTCCACGCAGGCGGAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 361572 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || || |||| | ||||||||||||||||||| Sbjct 361573 AGAGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 361632 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| ||| |||| | || | ||||||| ||||| | Sbjct 361633 ATACCCTCCTTATCCTGGATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCTACT 361692 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || ||||| |||||||| Sbjct 361693 TCTAGCGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 361739 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | ||||||||||| || |||||||| ||| Sbjct 361969 CCACCGCGGAGACGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 362028 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||| ||||| ||| |||| || |||||||||||||| || Sbjct 362029 AGGGTGCGGCCGTCCTCAAGCTGTTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 362088 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 362089 ATGCCCTCCTTGTC 362102 >seq267 Length=290730 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||||| ||| | ||| |||||||| || |||||||| || Sbjct 207170 CCACCACGCAGGCGGAGCACTAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 207229 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 207230 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 207289 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 207290 ATGCCCTCCTTGTC 207303 >seq53 Length=59568 Score = 91.5 bits (100), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| ||| || || | ||| || || || || | ||||||||||| || |||||||| Sbjct 12401 ATGATGCCGCCACGGAGACGGAGGACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAG 12460 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 ||| | |||||| ||||| || |||||||| ||| |||| | |||||||||||| Sbjct 12461 TCGGAAAGGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 12520 Query 131122 GGAGGGATTCCTTCTTTGTC 131141 || || || || || ||||| Sbjct 12521 GGGGGAATGCCCTCCTTGTC 12540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010021024640