Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq465 183 3e-41
seq6 152 5e-32
seq113 134 1e-26
seq267 102 8e-17
seq53 91.5 1e-13
>seq465
Length=132516
Score = 183 bits (202), Expect = 3e-41
Identities = 927/1451 (64%), Gaps = 45/1451 (3%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||||||||| ||||| || |||| ||||||||| | || | ||| || ||| | ||
Sbjct 112456 TTGACGACCTGGAACTCACCAGCCAGCACACGACGTGAGTAGATGTTCGAGGTGTATGGC 112515
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| || || || || || | |||| || || |||||| ||| |||
Sbjct 112516 TCGAAGCACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAACC 112575
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||||| || |||| ||| | ||||| | || | |||| |||||
Sbjct 112576 AGGAGAGAGTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACGAAGCCCAGTCCCAA 112635
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATG-CCCTCGCTGGC-GGGGC 145295
|| || || ||||| |||| | |||||||| || || |||| | | || |
Sbjct 112636 AGGTCAGAAGGAGTCACGCCCCAGAGATCGTACTG-AAGCTGACCCTTGGACACAGGCGA 112694
Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAG 145353
||| | | | | | | || ||||| | ||||||| ||||| || | ||
Sbjct 112695 ACCCTCGTATGTA---GCATATGGACCAAGCTCCTTGGCGATATCGCAGGACGACGTGAG 112751
Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCA-TCGCTCT 145412
||| || |||||||||||| || || |||||||| | | |||||| ||| ||
Sbjct 112752 AGCCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTTGGCTTCAGTCG-ACT 112810
Query 145413 CGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGG 145472
| | |||| || || | |||||||| || || ||||| | || | |||||||
Sbjct 112811 CAAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAACACCAAGACCGATGG 112870
Query 145473 GCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAA 145532
||| ||| | ||||| | ||| ||| | ||| || | || ||||| |
Sbjct 112871 GCCTATGGCGGAAATTGCTGCGGCGTGCCTCCTCCACAGGGTAGTGGTTGACCTCGATGA 112930
Query 145533 TTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACC 145592
| || || | ||| || || ||| | || | | | | ||| | ||||| || |
Sbjct 112931 TCTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCTTGTGGAAGTCGAA-C 112989
Query 145593 GAGCCTCG-TCAACGACCACACAGCTATTG-ACGGCGATCGACGCCAAATTACAAACTGC 145650
||| || | | | ||| || || | | ||||| || |||| || || || ||
Sbjct 112990 TCGCCACGCTTGTAGTCGACAAAG-GATGGAAGGGCGAGGGAAGCCAGGTTGCACACGGC 113048
Query 145651 CGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGT 145710
||| || | | || | | || ||||| | ||| | ||| | |||||
Sbjct 113049 GACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGGAGCTGCGAATGGT 113108
Query 145711 TCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCC 145770
|| || || | ||| || ||||||||||| ||||||||||| |||||| ||||
Sbjct 113109 ACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGCATGAACGGGTT 113168
Query 145771 GCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAG---TCCTGCGCACGCACCTG 145827
||||||||| ||||| || ||| || || | || | ||| ||||| ||
Sbjct 113169 GCCAGTCTCAGTCTGCG---CCTCGAGAATGGCGTACCAGAGCTTCTGGGCACGAACAGT 113225
Query 145828 CTGCTGGTAGCGGCCC-TCTTCT-----TCGTATTTCCTGTAGAGCTCCTCAAACGCGGA 145881
| | ||| ||| | |||| ||||| ||||||||||||| ||| |
Sbjct 113226 C------TCGCGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTCGAACTCATC 113279
Query 145882 ACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTT 145941
|||||| |||| || || || |||| |||||| ||||| || | ||| |||||||
Sbjct 113280 GCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCGTT 113339
Query 145942 GGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGC 146001
| | || |||| ||| || | ||| || | ||| || ||||| | | ||| || ||
Sbjct 113340 CTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCACGAGC 113399
Query 146002 TTTGCAATCCTCAGCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGT 146060
| || || ||| ||| | || | | | ||| | | | | |||||||
Sbjct 113400 TCGTACCTCTTCCTTACCGTGGTTCTTGCGT-AGGTCAAGGAAGCCGAATACATCCGCGT 113458
Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGT 146117
|||| || || | |||| ||||| || || || ||||||||||| || ||||
Sbjct 113459 GCCATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCTGATCGACGT 113518
Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177
|| | ||||||| |||| || | ||| || || || ||| | ||||| |
Sbjct 113519 AGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATGTTCCGTTGG 113578
Query 146178 TAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCCGC 146237
| || || |||| || || | || || ||||| | || | |||||
Sbjct 113579 TGCCACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTGAGTCCAATGCCGCCAG 113638
Query 146238 CGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC- 146295
|| |||||| || || || ||| | || || |||||||| ||||| ||||| ||
Sbjct 113639 CGGTCTTGGAGATCAACGCACACGTCTTC-AGTGTGTCGTAGATACCGTCGATGCTGTCC 113697
Query 146296 -GCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGA 146354
|||| ||| ||| || ||||| || ||||||| | | ||||| ||||| ||
Sbjct 113698 TCCTTC--ATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCGCGTTGA 113755
Query 146355 ACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCAT-CATCCGATACGTTTCGATA 146413
||| ||| || || || || || ||| | ||| | || || || || ||
Sbjct 113756 ACAGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAGTCG-TAGGTCTCAATG 113814
Query 146414 GCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGC 146473
|| | | |||||| |||||||| ||||| | ||||| |||||||||||||| || ||
Sbjct 113815 GCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGTGGG 113874
Query 146474 CGCTCCGCCAC 146484
||||| || ||
Sbjct 113875 CGCTCTGCAAC 113885
>seq6
Length=114070
Score = 152 bits (168), Expect = 5e-32
Identities = 351/521 (67%), Gaps = 27/521 (5%)
Strand=Plus/Plus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAG-CAGCACCGCGAC 46145
|| ||| | |||||||| |||||||||| | ||||||||| ||| || | | | ||
Sbjct 15163 CCATGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCT-CAGACAAGAACTCCAC 15221
Query 46146 TTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTT 46205
||| ||| | ||| | || |||||||| || ||||| |||| || ||| |||
Sbjct 15222 TTTTGCCAACCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCTCTTT 15281
Query 46206 TGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264
|| ||||||| | |||| || | || | | ||||| || || || || |||||
Sbjct 15282 CGCGTCCATCTTCTGGCTCAAGAAGCGCGGTC-TGATGCCAGGTCTTACCTTCTCCAACG 15340
Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT---CTACTAT---- 46317
|||| || || || ||||||||| |||| || |||||||| || || || || |
Sbjct 15341 AGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGCATGCCTGCTCTTCTCTCTTC 15400
Query 46318 --AACACTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGG 46375
||||| ||| | | |||| ||| ||| | ||| ||| ||||
Sbjct 15401 TCAACACCCGC---CCCAGCAAGGATGC---------CGTCAAGGCCATCATCACCGAGG 15448
Query 46376 CGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGA 46435
| || | |||||| ||||||| | || | || || ||| || ||||| |||||||
Sbjct 15449 CTGTTGAGATTGAGCAGGAGTTCCTCACCGAAGCTCTCCCCTGCGCTCTGCTCGGCATGA 15508
Query 46436 ACGC-ACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTT 46494
| | || ||| ||||| | ||||||||||| || || ||||| ||||| || |||
Sbjct 15509 ATTCCACCCTCA-TGTGCCAGTACATCGAGTTCGTCGCTGACCGCCTGCTGTTGGCCCTT 15567
Query 46495 CACCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTG 46554
| | | ||| | |||| ||| || || || || ||| | |||||||| ||
Sbjct 15568 GGCAACACCAAGGTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTC 15627
Query 46555 GAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
| |||||| || || || ||||| |||||||||||||| ||
Sbjct 15628 GCGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGATTA 15668
>seq113
Length=382967
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||||| |||||||| | ||||| || |||||||| || |||||||| || |
Sbjct 361741 CCTCCGCGCAGGCGCAGCACGAGATGTAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAC 361800
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| ||||||||||| || |||| || |||||||||||||||||
Sbjct 361801 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGA 361860
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 361861 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATTGTGTCGGATGACTCTACT 361920
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| || || || ||||| ||||||||
Sbjct 361921 TCAAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 361967
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| || |||| || ||||| || || | ||||||||||| ||||||||||| |||
Sbjct 361513 CCTCCACGCAGGCGGAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 361572
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| |||||||| || || |||| | |||||||||||||||||||
Sbjct 361573 AGAGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 361632
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| ||| |||| | || | ||||||| ||||| |
Sbjct 361633 ATACCCTCCTTATCCTGGATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCTACT 361692
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || ||||| ||||||||
Sbjct 361693 TCTAGCGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 361739
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | || | ||||||||||| || |||||||| |||
Sbjct 361969 CCACCGCGGAGACGGAGGACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 362028
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||| ||||| ||| |||| || |||||||||||||| ||
Sbjct 362029 AGGGTGCGGCCGTCCTCAAGCTGTTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 362088
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 362089 ATGCCCTCCTTGTC 362102
>seq267
Length=290730
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| || ||||||| ||| | ||| |||||||| || |||||||| ||
Sbjct 207170 CCACCACGCAGGCGGAGCACTAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 207229
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| ||
Sbjct 207230 AGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGA 207289
Query 131128 ATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 207290 ATGCCCTCCTTGTC 207303
>seq53
Length=59568
Score = 91.5 bits (100), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 1/140 (1%)
Strand=Plus/Plus
Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061
|||| ||| || || | ||| || || || || | ||||||||||| || ||||||||
Sbjct 12401 ATGATGCCGCCACGGAGACGGAGGACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAG 12460
Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121
||| | |||||| ||||| || |||||||| ||| |||| | ||||||||||||
Sbjct 12461 TCGGAAAGGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 12520
Query 131122 GGAGGGATTCCTTCTTTGTC 131141
|| || || || || |||||
Sbjct 12521 GGGGGAATGCCCTCCTTGTC 12540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472010021024640
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