Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq6 98.7 2e-15
seq53 86.0 1e-11
>seq6
Length=114070
Score = 98.7 bits (108), Expect = 2e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | ||||||| | || ||||| ||||||||||||||||||||| |||
Sbjct 15650 TCGAAGAAGTTGGTCTTGCCCGCGAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 15591
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| ||||| | |||||| || | | | |||||| || || ||||| |
Sbjct 15590 GCGTTGTAGACCTTGGTGTTGCCAAGGGCCAACAGCAGGCGGTCAGCGACGAACTCGATG 15531
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCC 251711
||||| | ||| || || ||||||||
Sbjct 15530 TACTGGCACATGAGGGTGGAATTCATGCC 15502
>seq53
Length=59568
Score = 86.0 bits (94), Expect = 1e-11
Identities = 123/168 (73%), Gaps = 4/168 (2%)
Strand=Plus/Plus
Query 280657 TTGAGGACCA-TATGACCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATT 280715
|||||| ||| | || |||| | ||||| || | ||| || ||||||| |||||
Sbjct 34028 TTGAGGCCCACTGTGCCCAAT-TCGGTCTCGATGCTGAGCTTGTCTCTCACTCCCGCATG 34086
Query 280716 CGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACA 280774
|| ||||| || || || ||| ||||| | || ||| || |||| ||||| |
Sbjct 34087 CGTGGTCTGTCCGGTGGACAGCGTGTCAAGGTCGTTCTCGCCGCTTGCTCA-TGGCAGCG 34145
Query 280775 CCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|||||| |||||||||||||||||||||| ||||| || ||||| ||
Sbjct 34146 TCCTCACTTGATCGTTCTCGACGAGCCTACTAACTACCTCGACCGTGA 34193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027830597326111
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |