Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq465 214 2e-50 seq6 107 2e-18 >seq465 Length=132516 Score = 214 bits (236), Expect = 2e-50 Identities = 1107/1742 (64%), Gaps = 53/1742 (3%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| || ||||| | || |||||||| | | |||||| || | Sbjct 112150 CGAAGGTAGTACATGCCGGTCTTCAAACCGAGCTTCCAGCCGGCGAAATGCATGGAAGTG 112209 Query 113657 AACTTGGAGAGTGTTGGACTT-TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 113715 | ||| | || ||| || | |||| || ||||| || |||||||||||||| Sbjct 112210 ATCTTACCCA-TGGTGGGCTCCTTCATGTGGATGTTCAATGACTGAGATTGATCGATGAA 112268 Query 113716 GCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 113775 | || || || || ||||| | || | | | ||||||||| || || | Sbjct 112269 GGCACCGCGGTCAGCAGCCATCTGGATGATGGTACGCTGCGAGATTTCCCATACGGTCTT 112328 Query 113776 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTT 113835 ||| ||| |||| | || |||||||| | ||| | |||||||| ||||| | | Sbjct 112329 GTAAAGGGTCTTGGTCTCTTCTGGGATGTTGGGGATCCTCTGGATGGAACCACCATC--T 112386 Query 113836 GACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCAC 113892 | | |||| | | |||||| | || ||||||||||| || | ||| |||| | Sbjct 112387 G-CAATGATACGGTTCTTCATGTTCTCAGACCAGAGACCCATGTCGACGAGGTCCTTGAG 112445 Query 113893 GAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGG 113951 ||| ||||| || |||||||| || || || | | || ||||| || | Sbjct 112446 GAGCCAAGGGTTGACGACCTGGAACTCACCAGCCAGCACACGACGTGAG-TAGATGTTCG 112504 Query 113952 TCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCA 114011 ||||||||||| |||||||| ||||| || | || || | || ||||| || |||| Sbjct 112505 AGGTGTATGGCTCGAAGCACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCA 112564 Query 114012 TGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGT 114071 |||| || | || || ||| || | ||| | | || ||||| | | Sbjct 112565 TGGGCGCAACCAGGAGAGAGTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACGAAG 112624 Query 114072 CCCAGTCGTA--GTTGAGCTTT-GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTT 114128 ||||||| | | | || ||| | ||| || | ||| |||| || ||| | Sbjct 112625 CCCAGTCCCAAAGGTCAGAAGGAGTCACGCCC---CAGAGATCGTACTGAAGCTGACCCT 112681 Query 114129 GGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCC---GCCAATTCGG 114185 ||| | ||||| ||||| |||| | ||||| || || |||| || | ||| Sbjct 112682 TGGACACAGGCGAACCCTCGTATGTAGCATATGGACC---AAGCTCCTTGGCGATATCGC 112738 Query 114186 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 114245 || || | ||| || ||||| || |||||||| || || | | || | ||||| Sbjct 112739 AGGACGACGTGAGAGCCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTTGG 112798 Query 114246 CCTC-GTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304 | || |||| | ||||| | || || | || |||| || ||||| || ||| Sbjct 112799 CTTCAGTCG-ACTCAAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAACA 112857 Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAA 114364 || || || || || | ||| | | ||| || || |||||| || || Sbjct 112858 CCAAGACCGATGGGCCTATGGCGGAAATTGCTGCGGCGTGCCTCCTCCACAGGGTAGTGG 112917 Query 114365 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 114424 || ||||| | | | || || || ||||| ||| | || | || || ||||| Sbjct 112918 TTGACCTCGATGATCTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCTTG 112977 Query 114425 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGA 114484 | | | || || || | || | | |||| | |||||||||| || ||||| Sbjct 112978 TGGAAGTCGAACTCGCCACGCTTGTAGTCGACAAAGGATGGAAGGGCGAGGGAAGCCAGG 113037 Query 114485 TTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAA 114544 || ||||| | | |||||| | ||||| |||| | ||| || || || | || || Sbjct 113038 TTGCACACGGCGACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGGAG 113097 Query 114545 CTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGC 114604 || |||||| || | |||||| || || ||||| |||| || || |||||||| ||| Sbjct 113098 CTGCGAATGGTACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGC 113157 Query 114605 ATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGC 114663 ||| | || | || ||||| || || | || |||||| || | ||||| | || | ||| Sbjct 113158 ATGAACGGGTTGCCAGTCTCAGTCTGCGCCTCGAGAATGGCGTACCAGAGCTTCTG-GGC 113216 Query 114664 TGGCACAGTGGCGTTGGCTCGCCCCTC---CTC---CTCGTACTTTGTGTAGAGGGCTTC 114717 | ||||| || || |||| ||| |||||| |||||||| | || Sbjct 113217 ACGAACAGTCTCG------CGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTC 113270 Query 114718 AAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA 114777 ||||| || || | | || | || || || || | ||||| | ||| | ||| Sbjct 113271 GAACTCATCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCCA 113330 Query 114778 TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAG 114837 | || ||| | || |||||||||||||| || || |||||||| || ||||||| Sbjct 113331 CTCGCCGTTCTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAG 113390 Query 114838 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 114897 || ||| || | ||||| | || || || || | || | ||| | | | Sbjct 113391 GTCACGAGCTCGTACCTCTTCCTTACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATAC 113450 Query 114898 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGC 114951 |||||||||||| || || ||||| | |||| | || | | || ||| | Sbjct 113451 ATCCGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACC---AGGGCGCTTGTTGCCACC 113507 Query 114952 CTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGA 115011 ||| | || || | || ||| || | || || ||||| || |||| ||||| || Sbjct 113508 CTGATCGACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGA 113567 Query 115012 TTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATA 115069 | || || || || | || || ||| | |||| | || || | | | Sbjct 113568 TGTTCCGTTGGTGCCACCAATGTAGGAGCC--GGTGGCACGGATGCGGTGCACATTGAGT 113625 Query 115070 CCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCG 115129 ||||| || || || ||| ||||| ||| ||| | | || || ||||||| ||| Sbjct 113626 CCAATGCCGCCAGCGGTCTTGGAGATCAACGCACACGTCTTCAGTGTGTCGTAGATACCG 113685 Query 115130 TCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTA 115189 ||||| ||| |||| | |||| ||||||||| ||||| || || | || || Sbjct 113686 TCGATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTT 113745 Query 115190 CCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTA 115248 || |||||||| || || || | || || |||| ||| ||| ||||| | ||||| Sbjct 113746 CCCGCGTTGAACAGCGTAGGCGAGGCATGTGTGAA-GTACTTTTGCGACATGTAGTCGTA 113804 Query 115249 GGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACAT 115308 |||||| | | | ||||||||| || || || || | | ||| ||||| | ||| Sbjct 113805 GGTCTCAATGGCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCAT 113864 Query 115309 GT 115310 || Sbjct 113865 GT 113866 >seq6 Length=114070 Score = 107 bits (118), Expect = 2e-18 Identities = 307/463 (66%), Gaps = 32/463 (7%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTT-CCCGTCCAAGCT-GATATTCTCC 125815 ||| || || || ||||||||||||||||| ||||| |||| | ||| ||| |||||| Sbjct 15669 GTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCG--CGAGCGAGATGTTCTCC 15612 Query 125816 ATAAAATCAAATGGGTTCTTTGAGTTCCAAAT-----TGTTGGCACC--CCAATCTGTTT 125868 || || || || ||||| | | ||| | | ||||| || |||| Sbjct 15611 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGACCTTGGTGTTGCCAAGGGCCAAC------ 15558 Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 || || || || | |||| |||| ||||||| |||| || ||||| |||| Sbjct 15557 -AGCAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGGGTGGAATTCATGCCGAG 15499 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 || || ||||| || || || |||| ||| |||||| || || || || | Sbjct 15498 CAGAGCGCAGGGGAGAGCTTCGGTGAGGAACTCCTGCTCAATCTCAACAGCCTCGGTGAT 15439 Query 125989 GATGGCGTGAATGGTGTCCACCCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCAC 126045 |||||| | | || ||| | || | | ||| | | || |||||| || Sbjct 15438 GATGGCCTTGACGGCATCCTTGCTGGGGCGGGTGTTGAGAAGAGA---GAAGAG---CAG 15385 Query 126046 G---GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAG 126102 | ||||| || ||| | |||||||||||||||||||| || || |||||| || Sbjct 15384 GCATGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAG 15325 Query 126103 TCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAACCCGAGAAGA 126161 |||||||| ||||| |||||||| | |||||| || | | | ||| || || ||||| Sbjct 15324 ACCTGGCATCAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAA-GAGCCGCTGAAGA 15266 Query 126162 AGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 126204 |||| ||||| || || || || | |||||| | ||||| Sbjct 15265 AGATACCCTCAACGGCAGCAAAGGCGACGAGACGGTTGGCAAA 15223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350083080680