Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq465 306 4e-78
>seq465
Length=132516
Score = 306 bits (338), Expect = 4e-78
Identities = 639/939 (68%), Gaps = 11/939 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | | ||||| |||||| || || ||| || ||||||||| || | |||
Sbjct 113948 AACTACCAGTTCTTTGGCTTCAAGACGCTAGAGCGCTCATACCTCCTCCGCATCAACGGC 113889
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| | ||||| || || || |||| ||||| |||||| | || || || ||| |
Sbjct 113888 AAGGTTGCAGAGCGCCCACAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGCGAA 113829
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATGGC 93893
||||| ||| | | | | | | ||||| | | ||| | || |||| |
Sbjct 113828 GACATTGAGAAGGCCATTGAGACCTACGACTACATGTCGCAAAAGTACTTCACACATG-C 113770
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953
| | || || |||||||||||||| || || || |||||||| || || ||||| ||
Sbjct 113769 CTCGCCTACGCTGTTCAACGCGGGAACGCCCAACCCTCAGATGTCATCCTGCTTCCTCAT 113710
Query 93954 -GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
||| | |||| ||| |||| ||| || | ||||| || ||| |||||| |
Sbjct 113709 CGAC-ATGAAGGAGGACAGCATCGACGGTATCTACGACACACTGAAGACGTGTGCGTTGA 113651
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| || ||| || || || || ||| ||| ||| | | ||||||| || ||||
Sbjct 113650 TCTCCAAGACCGCTGGCGGCATTGGACTCAATGTGCACCGCATCCGTGCCACCGGCTCCT 113591
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| | || ||||| || || ||||| || ||| |||| |||||||| |||| |||||
Sbjct 113590 ACATTGGTGGCACCAACGGAACATCCAATGGTCTCATCCCGATGCTCCGTGTCTACAACA 113531
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || |||||||| || |||||||| | | | ||| ||||||| |||| |
Sbjct 113530 ACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACC 113471
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
||||||| ||||||||||| || | ||| | ||||| || ||||||||||| || |
Sbjct 113470 TCGAGCCATGGCACGCGGATGTATTCGGCTTCCTTGACCTACGCAAGAACCACGGTAAGG 113411
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| || | || | |||||||||||||| |||||| | || || || || ||||| |
Sbjct 113410 AAGAGGTACGAGCTCGTGACCTCTTCTACGCCCTCTGGATTCCCGATCTCTTCATGAAGC 113351
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| || | | ||| || |||| || | || ||||| || || || || || |||
Sbjct 113350 GAGTGCAAGAGAACGGCGAGTGGACACTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCG 113291
Query 94373 ACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGG 94429
|||| | | ||| | | || || || | || | ||||||| | ||| || |||||
Sbjct 113290 ACGTCTACGGCGAT-GAG-TTCGAGGAGCTCTACACCCGTTACG-AGCGCGAGAACAAGG 113234
Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
| || | | ||| |||||| ||| | || | || | ||| ||||
Sbjct 113233 GTCGCGAGACTGTTCGTGCCCAGAAGCTCTGGTACGCCATTCTCGAGGCGCAGACTGAGA 113174
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
| || | || | ||| ||| ||||||| || |||| |||||||||||| || |||
Sbjct 113173 CTGGCAACCCGTTCATGCTGTACAAGGACGCTTGCAACAGGAAGTCCAACCAGAAGAACC 113114
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
|||| || ||||| || || ||||| ||||||||||||| ||| |||| || |
Sbjct 113113 TCGGTACCATTCGCAGCTCCAACCTCTGCACTGAGATTGTCGAGTTCACTGCTCCTGATG 113054
Query 94610 AGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCA 94648
|| | || ||||| ||||||| ||| || ||| ||||
Sbjct 113053 AGGTCGCCGTGTGCAACCTGGCTTCCCTCGCCCT-TCCA 113016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494720287317160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |