Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq465 224 1e-53
seq6 131 2e-25
>seq465
Length=132516
Score = 224 bits (248), Expect = 1e-53
Identities = 1110/1741 (64%), Gaps = 51/1741 (3%)
Strand=Plus/Plus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|| ||||||||||| || ||||| | || |||||||| | | |||||| || |
Sbjct 112150 CGAAGGTAGTACATGCCGGTCTTCAAACCGAGCTTCCAGCCGGCGAAATGCATGGAAGTG 112209
Query 115618 AACTTGGAGAGTGTTGGACTT-TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAA 115676
| ||| | || ||| || | |||| || ||||| || ||||||||||||||
Sbjct 112210 ATCTTACCCA-TGGTGGGCTCCTTCATGTGGATGTTCAATGACTGAGATTGATCGATGAA 112268
Query 115677 GCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCT 115736
| || || || || ||||| | || | | | ||||||||| || || |
Sbjct 112269 GGCACCGCGGTCAGCAGCCATCTGGATGATGGTACGCTGCGAGATTTCCCATACGGTCTT 112328
Query 115737 GTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTT 115796
||| ||| |||| | || |||||||| | ||| | ||||| || ||||| | |
Sbjct 112329 GTAAAGGGTCTTGGTCTCTTCTGGGATGTTGGGGATCCTCTGGATGGAACCACCATC--T 112386
Query 115797 GACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCAC 115853
| | |||| | | |||||| | || ||||||||||| || | ||| ||||
Sbjct 112387 G-CAATGATACGGTTCTTCATGTTCTCAGACCAGAGACCCATGTCGACGAGGTCCTT--- 112442
Query 115854 GAGGTGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATGT 115909
|||| || | ||||| || |||||||| || || || | | || |||||||
Sbjct 112443 GAGGAGCCAAGGGTTGACGACCTGGAACTCACCAGCCAGCACACGACGTGAG-TAGATGT 112501
Query 115910 TGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGG 115969
| | ||||||||||| |||||||| ||||| || | || || | || ||||| || |
Sbjct 112502 TCGAGGTGTATGGCTCGAAGCACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAG 112561
Query 115970 GCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGG 116029
||||||| || | || || |||||| | ||| | || ||||| | |
Sbjct 112562 GCATGGGCGCAACCAGGAGAGAGTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACG 112621
Query 116030 CGTCCCAGT--CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACC 116087
|||||| | || | || | || | | |||| | ||| |||| || |||
Sbjct 112622 AAGCCCAGTCCCAAAGGTCAG-AAGGAGTCACGC-CCCAGAGATCGTACTGAAGCTGACC 112679
Query 116088 TTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC---GCCAATTC 116144
| |||| | ||||| ||||| |||| ||||||| | ||| |||| || | ||
Sbjct 112680 CTTGGACACAGGCGAACCCTCGTATGTAGCATATGGAC---CAAGCTCCTTGGCGATATC 112736
Query 116145 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 116204
| || || | ||| || ||||| || |||||||| || || | | || | |||
Sbjct 112737 GCAGGACGACGTGAGAGCCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTT 112796
Query 116205 GGCCTC-GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGA 116263
||| || ||| || ||||| | ||||| | || |||| || ||||| || |
Sbjct 112797 GGCTTCAGTC-GACTCAAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAA 112855
Query 116264 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAA 116323
|||| || || || || | ||| | | ||| || || |||||| || ||
Sbjct 112856 CACCAAGACCGATGGGCCTATGGCGGAAATTGCTGCGGCGTGCCTCCTCCACAGGGTAGT 112915
Query 116324 AATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCT 116383
|| ||||| | | | || || || ||||| ||| | || | || || ||||
Sbjct 112916 GGTTGACCTCGATGATCTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCT 112975
Query 116384 TTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCA 116443
| | | | || || || | || | | |||| | |||||||||| || ||||
Sbjct 112976 TGTGGAAGTCGAACTCGCCACGCTTGTAGTCGACAAAGGATGGAAGGGCGAGGGAAGCCA 113035
Query 116444 GATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTG 116503
| || ||||| | | |||||| | ||||| |||| | ||| || || || | || |
Sbjct 113036 GGTTGCACACGGCGACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGG 113095
Query 116504 AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGA 116563
| || |||||| || | |||||| || || ||||| |||| || || |||||||| |
Sbjct 113096 AGCTGCGAATGGTACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACA 113155
Query 116564 GCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCG 116622
|||| | || | || ||||| || || | || |||||| || | ||| | | || | |
Sbjct 113156 GCATGAACGGGTTGCCAGTCTCAGTCTGCGCCTCGAGAATGGCGTACCAGAGCTTCTG-G 113214
Query 116623 GCTGGCACAGTGGCGTTGGCTCGCCCC---TCCTC---CTCGTACTTTGTGTAGAGGGCC 116676
|| | ||||| || || ||| | ||| |||||| |||||||| ||
Sbjct 113215 GCACGAACAGTCTCG------CGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCC 113268
Query 116677 TCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGAC 116736
|| ||||| || || | || | || || || || | || || | ||| | |
Sbjct 113269 TCGAACTCATCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTC 113328
Query 116737 CATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG 116796
|| | || ||| | || |||||||||||||| || || |||||||| || |||||
Sbjct 113329 CACTCGCCGTTCTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAG 113388
Query 116797 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 116856
|| || ||| || | ||||| | || || || || | || | ||| | |
Sbjct 113389 AGGTCACGAGCTCGTACCTCTTCCTTACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAAT 113448
Query 116857 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCC 116913
| |||||||||||| || || ||||| | |||| | || ||| ||| ||
Sbjct 113449 ACATCCGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCC 113508
Query 116914 TGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGAT 116973
|| | || || | || || ||| | || || ||||| || |||| ||||| |||
Sbjct 113509 TGATCGACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGAT 113568
Query 116974 TGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATAC 117031
|| || || || | || || ||| | | |||| | || ||| | | | |
Sbjct 113569 GTTCCGTTGGTGCCACCAATGTAGGAGCC--GGTGGCACGGATGCGGTGCACATTGAGTC 113626
Query 117032 CAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCAT 117091
|||| || || || ||| ||||| || ||| | | || || ||||||| || |
Sbjct 113627 CAATGCCGCCAGCGGTCTTGGAGATCAACGCACACGTCTTCAGTGTGTCGTAGATACCGT 113686
Query 117092 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTAC 117151
|||| ||| |||| | |||||||||||||| ||||| || || | || || |
Sbjct 113687 CGATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTC 113746
Query 117152 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAG 117210
| |||||||| || || || | || || |||| ||| ||| ||||| | ||||||
Sbjct 113747 CCGCGTTGAACAGCGTAGGCGAGGCATGTGTGAA-GTACTTTTGCGACATGTAGTCGTAG 113805
Query 117211 GTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATG 117270
||||| | | | ||||||||| || || || || | | ||| ||||| | ||||
Sbjct 113806 GTCTCAATGGCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCATG 113865
Query 117271 T 117271
|
Sbjct 113866 T 113866
>seq6
Length=114070
Score = 131 bits (144), Expect = 2e-25
Identities = 350/525 (67%), Gaps = 30/525 (6%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
||| || ||||| ||||||||||||||||| ||||| || |||| ||| ||||||||
Sbjct 15669 GTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGCGAGCGAGATGTTCTCCAT 15610
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-----TGTTGGCACC--CCAATCTGTTTGA 127343
|| || || ||||| | | ||| | | ||||| || |||| |
Sbjct 15609 GAAGTCGAAGGGGTTGGTGGCGTTGTAGACCTTGGTGTTGCCAAGGGCCAAC-------A 15557
Query 127344 GGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGA 127403
| || || || | |||| |||| ||||||| |||| || ||||| |||| |
Sbjct 15556 GCAGGCGGTCAGCGACGAACTCGATGTACTGGCACATGAGGGTGGAATTCATGCCGAGCA 15497
Query 127404 GGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGA 127463
| || ||||| || || || |||| ||| |||||| || ||||| || | ||
Sbjct 15496 GAGCGCAGGGGAGAGCTTCGGTGAGGAACTCCTGCTCAATCTCAACAGCCTCGGTGATGA 15437
Query 127464 TGGCGTGAATAGTGTCCACCCCAGGTC---TATTGCGTAAAGTCTTGAAGAGTTCCA--C 127518
|||| | | | ||| | || | | ||| | | || |||||| || |
Sbjct 15436 TGGCCTTGACGGCATCCTTGCTGGGGCGGGTGTTGAGAAGAGA---GAAGAG---CAGGC 15383
Query 127519 A-GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGAC 127577
| ||||| || ||| | |||||||||||||||||||| || || |||||| ||||
Sbjct 15382 ATGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGAC 15323
Query 127578 CTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAG 127636
||||||| ||||| |||||||| | |||||| || | | | ||| ||||| |||||||
Sbjct 15322 CTGGCATCAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAA-GAGCCGCTGAAGAAG 15264
Query 127637 ATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA 127696
|| ||||| || || || || | ||||| | |||||| | | | | |||| | |
Sbjct 15263 ATACCCTCAACGGCAGCAAAGGCGACGAGACGGTTGGCAAAAGTG-GAGTTCTTGTCTGA 15205
Query 127697 -AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740
| |||||| | ||||| | ||||| || ||| ||||| ||
Sbjct 15204 GATCCACTTGAGAGCCCAGTCGGCCTTCTTGCGGATGCATGGAAC 15160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613503587976360
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