Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq465 109 9e-19
>seq465
Length=132516
Score = 109 bits (120), Expect = 9e-19
Identities = 326/494 (66%), Gaps = 7/494 (1%)
Strand=Plus/Plus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCC-TGCTTCTCAGATAGTACAT 203895
||||| || || ||||| || |||| | || | |||| || | | || ||||||||
Sbjct 112105 TCTTGGTCGACGGTGAATTGGATGG-GAGCAGAGGCGGCCATGGTACGAAGGTAGTACAT 112163
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955
||||||||| | || || ||| ||| | |||||||||| | || | || | |
Sbjct 112164 GCCGGTCTTCAAACCGAGCTTCCAGCCGGCGAAATGCATGGAAGTGATCTTACCCATGGT 112223
Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014
||| || |||||| ||||||| ||||| ||| |||||| ||||| || || || |
Sbjct 112224 GGGCTCCTTCATGTGGATGTTCAATGACTGAGATTGATCGATG-AAGGCACCGCGGTCAG 112282
Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG-AACACGTCTCTG 204073
| ||||| | ||| ||||| |||||| || ||||| || |||||| || |||| ||
Sbjct 112283 CAGCCATCTGGATGATGGTACGCTGCGAGATTTCCCATACGGTCTTGTAAAGGGTCT-TG 112341
Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133
|| | || || | | | || ||| || || || || || | | ||
Sbjct 112342 GTCTCTTCTGGGATGTTGGGGATCCTCTGGATGGAACCACCATCTGCAATGATACGGTTC 112401
Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | ||| ||| | |||| || || ||| | || ||||||| |
Sbjct 112402 TTCATGTTCTCAGACCAGAGACCCATGTCGACGAGGTCCTTGAGGAGCCAAGGGTTGACG 112461
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || || | |||||| | || | | | | ||| |||| |||| |||||
Sbjct 112462 ACCTGGAACTCACCAGCCAGCACACGACGTGAGTAGATGTTCGAGGTGTATGGCTCGAAG 112521
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
||||||||| || | |||||| | || ||| || |||||||| || | || ||
Sbjct 112522 CACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAACCAGGAGA 112581
Query 204314 GAGTTGCGCACACC 204327
||||||||||||||
Sbjct 112582 GAGTTGCGCACACC 112595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795150518523760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |