Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq465 109 9e-19 >seq465 Length=132516 Score = 109 bits (120), Expect = 9e-19 Identities = 326/494 (66%), Gaps = 7/494 (1%) Strand=Plus/Plus Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCC-TGCTTCTCAGATAGTACAT 203895 ||||| || || ||||| || |||| | || | |||| || | | || |||||||| Sbjct 112105 TCTTGGTCGACGGTGAATTGGATGG-GAGCAGAGGCGGCCATGGTACGAAGGTAGTACAT 112163 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 ||||||||| | || || ||| ||| | |||||||||| | || | || | | Sbjct 112164 GCCGGTCTTCAAACCGAGCTTCCAGCCGGCGAAATGCATGGAAGTGATCTTACCCATGGT 112223 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014 ||| || |||||| ||||||| ||||| ||| |||||| ||||| || || || | Sbjct 112224 GGGCTCCTTCATGTGGATGTTCAATGACTGAGATTGATCGATG-AAGGCACCGCGGTCAG 112282 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG-AACACGTCTCTG 204073 | ||||| | ||| ||||| |||||| || ||||| || |||||| || |||| || Sbjct 112283 CAGCCATCTGGATGATGGTACGCTGCGAGATTTCCCATACGGTCTTGTAAAGGGTCT-TG 112341 Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 || | || || | | | || ||| || || || || || | | || Sbjct 112342 GTCTCTTCTGGGATGTTGGGGATCCTCTGGATGGAACCACCATCTGCAATGATACGGTTC 112401 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | ||| ||| | |||| || || ||| | || ||||||| | Sbjct 112402 TTCATGTTCTCAGACCAGAGACCCATGTCGACGAGGTCCTTGAGGAGCCAAGGGTTGACG 112461 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | |||||| | || | | | | ||| |||| |||| ||||| Sbjct 112462 ACCTGGAACTCACCAGCCAGCACACGACGTGAGTAGATGTTCGAGGTGTATGGCTCGAAG 112521 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||||||||| || | |||||| | || ||| || |||||||| || | || || Sbjct 112522 CACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAACCAGGAGA 112581 Query 204314 GAGTTGCGCACACC 204327 |||||||||||||| Sbjct 112582 GAGTTGCGCACACC 112595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150518523760