Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq418 246 4e-60
seq465 147 3e-30
seq378 141 1e-28
seq427 107 2e-18
>seq418
Length=238847
Score = 246 bits (272), Expect = 4e-60
Identities = 502/743 (68%), Gaps = 6/743 (1%)
Strand=Plus/Minus
Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465
||||| || || ||||| || || | | |||||| | ||| | ||||| ||
Sbjct 76713 TTCTTGTGCTTGCGTTTGAATTCGTTTGTGAAGTGGTTGACGAGACGGTTGTCGAAGTCC 76654
Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525
|||||||||||||| || || || || || | ||||| || |||||||| | || |||
Sbjct 76653 TCACCACCCAAGTGAGTGTCACCGGCAGTAGACTTGACCTCGAAGATACCCTCCTCGATG 76594
Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585
| | | ||| ||||| || ||||| ||||||||||| || ||||| ||||| ||
Sbjct 76593 GTCAGGAGCGAGACATCGAAGGTACCGCCACCCAGGTCGAAGATGAGGACGTTGCGCTCA 76534
Query 7586 TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATA 7645
| | | ||||| || |||||||| ||||| || || || || || || || || |||
Sbjct 76533 CCTTGGGTCTTCTTGTCAAGACCGTAGGCGATGGCGGCAGCTGTGGGCTCGTTGATGATA 76474
Query 7646 CGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705
|| || ||| ||||| || || | || || || || || || || || || |||
Sbjct 76473 CGGAGGACGTTGAGGCCGGCGATGAGACCTGCGTCCTTGGTAGCCTGACGCTGGGAGTCG 76414
Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765
|| ||||| || || || || || || |||| |||| | |||||| || || ||
Sbjct 76413 TTGAAGTAAGCGGGAACAGTGACAACGGCGTTGTTGACGGTGCCACCGAGGTAGGACTCT 76354
Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825
||| | || |||| ||||| || ||||| ||||| ||||| |||| | || |||
Sbjct 76353 GCGGTTTCCCTCATCTTGGTGAGGACCATGGATGAGATCTCCTCAGGTGTGAAAGTCTTC 76294
Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885
|| || || || || | | || | || || |||| | ||| |||||
Sbjct 76293 TCCTCGCCCTTGAACTCGATCTGGATGACAGGCTT-GCCGC--CCTTATCGATGACCTTG 76237
Query 7886 TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGA 7945
| | | | ||||| || | || |||| || | ||||| | ||||| ||
Sbjct 76236 AAGGGGAAGTGCTTCATGTCAGCCTGAACCTCAGCATCGGCGAACTTGCGGCCGATGAGG 76177
Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005
|||||||| ||||| |||||||| |||||||||||| ||||||||||| | |||
Sbjct 76176 CGCTTTGCGTCAAAGACTGTGTTGGCGGGGTTCATGGCGACCTGGTTCTTCGCAGAGTCT 76117
Query 8006 CCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065
||||| ||||| || | || || || || ||| |||| || || || || || ||
Sbjct 76116 CCGATGAGACGCTC---GGTGTCGGTGAAGGCAACGAACGAGGGCGTTGTGCGGTTACCC 76060
Query 8066 TGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTT 8125
||||| || || || || || | |||||||| ||| |||||||| || |||||
Sbjct 76059 TGGTCATTGGCGATGATCTCAATGCGGTCGTCCCTGAAGATACCGACGCAAGAGTACGTG 76000
Query 8126 GTTCCTAAATCAATACCGATTGC 8148
|| || | || |||||||| ||
Sbjct 75999 GTACCCAGGTCGATACCGATCGC 75977
Score = 158 bits (174), Expect = 2e-33
Identities = 261/377 (69%), Gaps = 0/377 (0%)
Strand=Plus/Minus
Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069
||||| | ||||| ||||| ||||||| || ||||| || || ||||||||||||||
Sbjct 77330 TCACCAGACAAGATAGCGGCCTGGACCGCAGCACCGTAGGCAACAGCCTCATCGGGGTTG 77271
Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129
|| | || || | || || ||||| || | || || | ||| | || | || |||
Sbjct 77270 ATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGTCGGAGACCATCTTCTGGACCTTTGGG 77211
Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189
|| || || |||||||||||||| ||||| || | || | || || || ||||| | |
Sbjct 77210 ATACGGGTGGATCCACCGACCAAGACGATCTCGTGGACGGTAGACTTGTCAATCTTGGCG 77151
Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249
|| || || || ||||| ||||| ||||| | |||| ||||| |||
Sbjct 77150 TCGCGGAGGACACGCTCAACAGGCTCCATGGTGGAGCGGAAGAGGTCCTGGCACAGCTCC 77091
Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309
|| || || |||||||| ||||| || ||||| || | || ||| | | || || ||
Sbjct 77090 TCGAAGCGGGCACGGGTGATGGAGGTGTAGAAGTCGATACCCTCGAACAGGGAGTCGATC 77031
Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369
|| |||| || || || | || || | || ||||| || ||||| || || |||||
Sbjct 77030 TCGATGGAGGTCTGCGCGGAGGAGGACAGGGTACGCTTGGCCCGCTCGCAAGCAGTTCGG 76971
Query 7370 AAACGACGAAGGGCACG 7386
| ||| || || |||||
Sbjct 76970 AGACGGCGGAGAGCACG 76954
>seq465
Length=132516
Score = 147 bits (162), Expect = 3e-30
Identities = 344/517 (67%), Gaps = 13/517 (3%)
Strand=Plus/Plus
Query 105562 ACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCG-- 105619
|| || |||||||| | ||| |||||||| | ||| | |||||||| ||| ||||
Sbjct 113347 ACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCACGAG--CTCGTA 113404
Query 105620 CCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATG 105679
||||||| | ||| || ||| || | || || || ||| | ||| ||||||||||
Sbjct 113405 CCTCTTCCTTACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATACATCCGCGTGCCATG 113464
Query 105680 GTTCTAAATAGACTGCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATATC 105733
| || | |||| || | || || | | ||| || | |||| ||| || |
Sbjct 113465 GCTCGAGGTAGATGGCGAAAGCACC---AGGGCGCTTGTTGCCACCCTGATCGACGTAGC 113521
Query 105734 TTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTC 105793
||||| ||| || || || | ||| || || | ||||| ||||||||| || || |
Sbjct 113522 GAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATGTTCCGTTGGTGC 113581
Query 105794 CACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCC 105853
||| ||| | || | ||||| | ||| || | | ||||| || |||||
Sbjct 113582 CACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTGAGTCCAATGCCGCCAGCGG 113641
Query 105854 ACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCT 105913
||| ||| ||||||| || | ||| ||||| ||||||||||| || || ||||
Sbjct 113642 TCTTGGAGATCAACGCACACGTCTTCAGTGTGTCGTAGATACCGTCGATGCTGTCCTCCT 113701
Query 105914 TATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAG 105973
| | | || ||||| || |||||||| || || |||| || || || |||||||| |
Sbjct 113702 TCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCGCGTTGAACAGCG 113761
Query 105974 TTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGAT 106033
| || | ||||| |||| | || ||| | ||||| || || | | | | |
Sbjct 113762 TAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAGTCGTAGGTCTCAATGGCCTTCT 113821
Query 106034 CAATATCGTGTCCATGAATACCAATAGCGACGCGCAT 106070
|||| || | ||||| || |||| ||||| |||||
Sbjct 113822 CAATGTCTTCGCCATGGATGCCAACGGCGACACGCAT 113858
>seq378
Length=255854
Score = 141 bits (156), Expect = 1e-28
Identities = 234/337 (69%), Gaps = 7/337 (2%)
Strand=Plus/Plus
Query 7424 AACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483
||||||| |||||| |||||| | | |||||||||| |||||||| || ||
Sbjct 45015 AACTCTTTCTTGAAGTGGTCAAGGAGGTTGGTGTCGAAATCTTGTCCACCCAAATGGGTG 45074
Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543
|| || ||||| || ||||| |||| ||| || | ||||| | | || |||||
Sbjct 45075 TCACCAGCGGTGGCCTTGACAGTGAAGACACCACCCTGAATGTGCAGAAGAGACACATCG 45134
Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTT---- 7599
|| ||||||||||| || || | ||||| |||||| | || | ||| | ||
Sbjct 45135 AAAGTACCACCACCGAGATCGTAGATGAGGACGTTCCTCTCCT--TCTCGGACTTTCCGG 45192
Query 7600 -ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCA 7658
| |||||||||| |||||||| || || || || || || || ||||| ||| ||| |
Sbjct 45193 AACCGAGACCGTAAGCGATAGCTGCGGCGGTAGGCTCGTTGATGATACGGAGAACGTTGA 45252
Query 7659 GGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718
|||||||||| | | || || || || ||||| || || ||||| |||||||| |
Sbjct 45253 GGCCAGCAATGGCACCGGCGTCCTTGGTAGCTTGACGCTGGTTGTCGTTGAAGTAGGCGG 45312
Query 7719 GGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
| || || | ||| || | | || ||| | |||||
Sbjct 45313 GCACGGTGATGACGGCCTTCTCAACCTTCATGCCGAG 45349
>seq427
Length=214910
Score = 107 bits (118), Expect = 2e-18
Identities = 239/358 (67%), Gaps = 3/358 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|| ||||| |||||||| | || || || || ||||| | | || || || |||||
Sbjct 198318 TCAAAATCCTCACCACCAAGATGGGTGTCACCAGCGGTAGACTGAACCTCGAAAATACCC 198377
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|| || | | | || ||||| || ||||||||||| || ||| | | ||| ||
Sbjct 198378 GACTCGATAGTGAGAATGGACACATCGAAAGTACCACCACCAAGATCATAGACGAGAACC 198437
Query 7577 TTCGTATCGTC---GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| ||| | ||| | ||| ||||||||||| || | ||| ||||| || ||
Sbjct 198438 TGGCGCTCGCCCTTGTCGGCGACCTTGTCGAGACCGTAGGCCAAAGCAGCCGCAGTGGGC 198497
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693
|| || | || ||| ||| ||| || || || ||||| | || || || || ||
Sbjct 198498 TCGTTGACAACACGGAGAACGTTGAGACCGGCGATAGTGCCAGCGTCCTTTGTGGCGGCA 198557
Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753
|| || | ||||| |||||||| || || || || || |||| | | || || |||
Sbjct 198558 CGCTGGGCGTCGTTGAAGTAGGCGGGAACGGTGACAACAGCGTTCTTCACGGGCTCGCCG 198617
Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811
||||| || || || || ||||| ||| |||||||| | || ||||| ||||
Sbjct 198618 AGATAGCTCTCAGCAATCTCCTTCATCTTGCCGAGAACCATAGCGGAGATCTCCTCAG 198675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635129060655640
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