Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq465 206 3e-48
seq6 138 1e-27
>seq465
Length=132516
Score = 206 bits (228), Expect = 3e-48
Identities = 1109/1749 (63%), Gaps = 51/1749 (3%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
||||||| ||||| ||||||| ||||| | || |||||||| ||||| ||||| |
Sbjct 113874 CCCACAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGCGAAGACATTGAGAAGGC 113815
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729
| ||||| |||||| | ||||| | ||| |||| || || | || || || |
Sbjct 113814 CATTGAGACCTACGACTACATGTCGCAAAAGTAC-TTCACACATGCCTCGCCTACGCTGT 113756
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
||||||| || || || | || || ||||| || ||||| || | | |||||||
Sbjct 113755 TCAACGCGGGAACGCCCAACCCTCAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGG 113696
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGG 111845
| ||| | || || |||| ||| |||||| ||||| ||||| |||
Sbjct 113695 ACAGCATCGACGGTATCTACGACAC----ACTGAAGACGTGTGCGTTGATCTCCAAGACC 113640
Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAG 111903
||||| || || || | | | || || | |||| | | ||| || || | |
Sbjct 113639 GCTGGCGGCATTGGACTCAATGTGCACCGCATCCGTGCCACC--GGCTCCTACATTGGTG 113582
Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963
| || || || ||| ||||| | || || ||||| || || | ||| ||| || |
Sbjct 113581 GCACCAACGGAACATCCAATGGTCTCATCCCGATGCTCCGTGTCTACAACAACACCGCTC 113522
Query 111964 GCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020
|||| || | || | ||| ||| || || |||| |||| || |||||||
Sbjct 113521 GCTACGTCGATCAGGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACCTCGAGCCAT 113462
Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080
||||||||||| | | | |||||||| | || ||||| ||| | || |||| |
Sbjct 113461 GGCACGCGGATGTATTCGGCTTCCTTGACCTACGCAAGAACCACGGTAAGGAAGAGGTAC 113402
Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140
| || || ||||||| ||| ||||||||||| ||||||||||||||| |||| | |
Sbjct 113401 GAGCTCGTGACCTCTTCTACGCCCTCTGGATTCCCGATCTCTTCATGAAGCGAGTGCAAG 113342
Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200
||| ||| | ||| | ||| | || || || || || ||||| |||| | | |
Sbjct 113341 AGAACGGCGAGTGGACACTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACG 113282
Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG-----GAAGAA-AGTCGGGCGACTG 112254
| || ||||| || | |||||||| |||||| ||| || |||| | |||||
Sbjct 113281 GCGATGAGTTCGAGGAGCTCTACACCCGTTACGAGCGCGAGAACAAGGGTCGCGAGACTG 113222
Query 112255 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314
|| |||| || | ||| | || |||||| || | || || |||||||| |
Sbjct 113221 -TTCGTGCCCAGAAGC-----TCTGGTACGCCATTCTCGAGGCGCAGACTGAGACTGGCA 113168
Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374
|| | ||||| ||||| ||||| || ||| ||| || || ||||| | |||
Sbjct 113167 ACCCGTTCATGCTGTACAAGGACGCTTGCAACAGGAAGTCCAACCAGAAGAACCTCGGTA 113108
Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434
|| || ||||||||||| || || || | || || || | |||||| |
Sbjct 113107 CCATTCGCAGCTCCAACCTCTGCACTGAGATTGTCGAGTTCACTGCTCCTGATGAGGTCG 113048
Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA- 112493
| ||||| ||||| || || |||| || || | ||| || | | | | | |
Sbjct 113047 CCGTGTGCAACCTGGCTTCCCTCGCCCTTCCATCCTTTGTCGA-CTACAAGCGTGGCGAG 112989
Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553
|| || | | || |||||||| || || | |||||| ||||| |||| |
Sbjct 112988 TTCGACTTCCACAAGCTCCACGAGGTGACCATGGTCGTCACACGTAACCTCAACAAGATC 112929
Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613
|| || || ||||| || ||| || || ||| | | || | ||
Sbjct 112928 ATCGAGGTCAACCACTACCCTGTGGAGGAGGCACGCCGCAGCAATTTCCGCCATAGGCCC 112869
Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT 112670
|| ||||| ||||| || ||||| || |||| ||| | ||| ||| | | |||
Sbjct 112868 ATCGGTCTTGGTGTTCAGGGTCTTGCTGATGCTTTCCTCGCCCTTCGTCTGC---CTTTT 112812
Query 112671 GATTCCGAC-GAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGC 112729
|| | |||| ||||| ||| | |||| | | || || |||||||| || ||||| ||
Sbjct 112811 GAGT-CGACTGAAGCCAAGAAGCTCAACACCCAGATCTTCGAGACAATTTACCACGCGGC 112753
Query 112730 TCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789
||| | || | || | || ||| ||||||||||| || | ||||||||
Sbjct 112752 TCTCACGTCGTCCTGCGATATCGCCAAGGAGCTTGGTCCATATGCTACATACGAGGGTTC 112693
Query 112790 TCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTT 112844
|| | || |||||| |||||| | ||| | |||| |||| || | |||
Sbjct 112692 GCCTGTGTC-CAAGGGTCAGCTTCAGTACGATCTCTGGG-GCGTGACTCCTTCTGACCTT 112635
Query 112845 CACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 112904
| ||||||| | | ||||| ||| || | ||| | || ||| |||
Sbjct 112634 ---TGGGACTGGGCTTCGTTGAAGGACAAGATCGCTCAGCATGGTGTGCGCAACTCTCTC 112578
Query 112905 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 112964
|| | || || ||||| || ||||| || | || || | || || || || |||||
Sbjct 112577 CTGGTTGCGCCCATGCCTACTGCCTCGACTTCGCAGATTCTTGGAAACAACGAGTGCTTC 112518
Query 112965 GAACCCTACACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGT 113023
|| || ||||| |||||||||| || | | | || || || ||||| | | ||
Sbjct 112517 GAGCCATACACCTCGAACATCTA-CTCACGTCGTGTGCTGGCTGGTGAGTTCCAGGTCGT 112459
Query 113024 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 113083
|||| ||| | | |||||| || || ||||||||||| || | |||||| |
Sbjct 112458 CAACCCTTGGCTCCTCAAGGACCTCGTCGACATGGGTCTCTGGTCTGAGAACATGAAGAA 112399
Query 113084 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAA 113143
| || | || ||||||||||| || | || | || ||||| || | ||
Sbjct 112398 CCGTATCATTGCAGATGGTGGTTCCATCCAGAGGATCCCCAACATCCCAGAAGAGACCAA 112339
Query 113144 GAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGA 113203
|| | ||| || || ||||||||| | | |||| | ||||| || ||
Sbjct 112338 GACCCTTTACAAGACCGTATGGGAAATCTCGCAGCGTACCATCATCCAGATGGCTGCTGA 112279
Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGAT 113263
|| ||| |||||| |||||| ||| |||| | |||| | || || ||
Sbjct 112278 CCGCGGTGCCTTCATCGATCAATCTCAGTCATTGAACATCCACATGAAGGAGCCCACCAT 112219
Query 113264 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 113323
| ||| || |||| ||||| | | | |||||| ||| | || || || |||||
Sbjct 112218 GGGTAAGATCACTTCCATGCATTTCGCCGGCTGGAAGCTCGGTTTGAAGACCGGCATGTA 112159
Query 113324 TTACCTCCG 113332
||||| ||
Sbjct 112158 CTACCTTCG 112150
>seq6
Length=114070
Score = 138 bits (152), Expect = 1e-27
Identities = 168/224 (75%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 102168
||||||||| || | ||||| || || |||||| | |||||| | | | |||| | |
Sbjct 15159 AGTTCCATGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCTCAGACAAGAACTC 15218
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
| ||||| | || ||| |||| ||||| |||||||||||||||||| || |
Sbjct 15219 CA-CTTTTGCCAACCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCT 15277
Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287
| ||| ||| | || | |||||||||||||| ||||| ||||||||||| |||||||
Sbjct 15278 CTTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCC 15336
Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||||||| ||||| ||||||||||| | ||| || |||||
Sbjct 15337 AACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGC 15380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620738745379120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |