Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq465 206 3e-48 seq6 138 1e-27 >seq465 Length=132516 Score = 206 bits (228), Expect = 3e-48 Identities = 1109/1749 (63%), Gaps = 51/1749 (3%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||||||| ||||| ||||||| ||||| | || |||||||| ||||| ||||| | Sbjct 113874 CCCACAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGCGAAGACATTGAGAAGGC 113815 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729 | ||||| |||||| | ||||| | ||| |||| || || | || || || | Sbjct 113814 CATTGAGACCTACGACTACATGTCGCAAAAGTAC-TTCACACATGCCTCGCCTACGCTGT 113756 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||| || || || | || || ||||| || ||||| || | | ||||||| Sbjct 113755 TCAACGCGGGAACGCCCAACCCTCAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGG 113696 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAA----TGTGCCCAAATCTCAAAGTGG 111845 | ||| | || || |||| ||| |||||| ||||| ||||| ||| Sbjct 113695 ACAGCATCGACGGTATCTACGACAC----ACTGAAGACGTGTGCGTTGATCTCCAAGACC 113640 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAG 111903 ||||| || || || | | | || || | |||| | | ||| || || | | Sbjct 113639 GCTGGCGGCATTGGACTCAATGTGCACCGCATCCGTGCCACC--GGCTCCTACATTGGTG 113582 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 | || || || ||| ||||| | || || ||||| || || | ||| ||| || | Sbjct 113581 GCACCAACGGAACATCCAATGGTCTCATCCCGATGCTCCGTGTCTACAACAACACCGCTC 113522 Query 111964 GCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCAT 112020 |||| || | || | ||| ||| || || |||| |||| || ||||||| Sbjct 113521 GCTACGTCGATCAGGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACCTCGAGCCAT 113462 Query 112021 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGC 112080 ||||||||||| | | | |||||||| | || ||||| ||| | || |||| | Sbjct 113461 GGCACGCGGATGTATTCGGCTTCCTTGACCTACGCAAGAACCACGGTAAGGAAGAGGTAC 113402 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | || || ||||||| ||| ||||||||||| ||||||||||||||| |||| | | Sbjct 113401 GAGCTCGTGACCTCTTCTACGCCCTCTGGATTCCCGATCTCTTCATGAAGCGAGTGCAAG 113342 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| ||| | ||| | ||| | || || || || || ||||| |||| | | | Sbjct 113341 AGAACGGCGAGTGGACACTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACG 113282 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG-----GAAGAA-AGTCGGGCGACTG 112254 | || ||||| || | |||||||| |||||| ||| || |||| | ||||| Sbjct 113281 GCGATGAGTTCGAGGAGCTCTACACCCGTTACGAGCGCGAGAACAAGGGTCGCGAGACTG 113222 Query 112255 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 || |||| || | ||| | || |||||| || | || || |||||||| | Sbjct 113221 -TTCGTGCCCAGAAGC-----TCTGGTACGCCATTCTCGAGGCGCAGACTGAGACTGGCA 113168 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 || | ||||| ||||| ||||| || ||| ||| || || ||||| | ||| Sbjct 113167 ACCCGTTCATGCTGTACAAGGACGCTTGCAACAGGAAGTCCAACCAGAAGAACCTCGGTA 113108 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 || || ||||||||||| || || || | || || || | |||||| | Sbjct 113107 CCATTCGCAGCTCCAACCTCTGCACTGAGATTGTCGAGTTCACTGCTCCTGATGAGGTCG 113048 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA- 112493 | ||||| ||||| || || |||| || || | ||| || | | | | | | Sbjct 113047 CCGTGTGCAACCTGGCTTCCCTCGCCCTTCCATCCTTTGTCGA-CTACAAGCGTGGCGAG 112989 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 || || | | || |||||||| || || | |||||| ||||| |||| | Sbjct 112988 TTCGACTTCCACAAGCTCCACGAGGTGACCATGGTCGTCACACGTAACCTCAACAAGATC 112929 Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 || || || ||||| || ||| || || ||| | | || | || Sbjct 112928 ATCGAGGTCAACCACTACCCTGTGGAGGAGGCACGCCGCAGCAATTTCCGCCATAGGCCC 112869 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT 112670 || ||||| ||||| || ||||| || |||| ||| | ||| ||| | | ||| Sbjct 112868 ATCGGTCTTGGTGTTCAGGGTCTTGCTGATGCTTTCCTCGCCCTTCGTCTGC---CTTTT 112812 Query 112671 GATTCCGAC-GAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGC 112729 || | |||| ||||| ||| | |||| | | || || |||||||| || ||||| || Sbjct 112811 GAGT-CGACTGAAGCCAAGAAGCTCAACACCCAGATCTTCGAGACAATTTACCACGCGGC 112753 Query 112730 TCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 ||| | || | || | || ||| ||||||||||| || | |||||||| Sbjct 112752 TCTCACGTCGTCCTGCGATATCGCCAAGGAGCTTGGTCCATATGCTACATACGAGGGTTC 112693 Query 112790 TCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTT 112844 || | || |||||| |||||| | ||| | |||| |||| || | ||| Sbjct 112692 GCCTGTGTC-CAAGGGTCAGCTTCAGTACGATCTCTGGG-GCGTGACTCCTTCTGACCTT 112635 Query 112845 CACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT 112904 | ||||||| | | ||||| ||| || | ||| | || ||| ||| Sbjct 112634 ---TGGGACTGGGCTTCGTTGAAGGACAAGATCGCTCAGCATGGTGTGCGCAACTCTCTC 112578 Query 112905 TTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTT 112964 || | || || ||||| || ||||| || | || || | || || || || ||||| Sbjct 112577 CTGGTTGCGCCCATGCCTACTGCCTCGACTTCGCAGATTCTTGGAAACAACGAGTGCTTC 112518 Query 112965 GAACCCTACACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGT 113023 || || ||||| |||||||||| || | | | || || || ||||| | | || Sbjct 112517 GAGCCATACACCTCGAACATCTA-CTCACGTCGTGTGCTGGCTGGTGAGTTCCAGGTCGT 112459 Query 113024 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 113083 |||| ||| | | |||||| || || ||||||||||| || | |||||| | Sbjct 112458 CAACCCTTGGCTCCTCAAGGACCTCGTCGACATGGGTCTCTGGTCTGAGAACATGAAGAA 112399 Query 113084 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAA 113143 | || | || ||||||||||| || | || | || ||||| || | || Sbjct 112398 CCGTATCATTGCAGATGGTGGTTCCATCCAGAGGATCCCCAACATCCCAGAAGAGACCAA 112339 Query 113144 GAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGA 113203 || | ||| || || ||||||||| | | |||| | ||||| || || Sbjct 112338 GACCCTTTACAAGACCGTATGGGAAATCTCGCAGCGTACCATCATCCAGATGGCTGCTGA 112279 Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGAT 113263 || ||| |||||| |||||| ||| |||| | |||| | || || || Sbjct 112278 CCGCGGTGCCTTCATCGATCAATCTCAGTCATTGAACATCCACATGAAGGAGCCCACCAT 112219 Query 113264 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 113323 | ||| || |||| ||||| | | | |||||| ||| | || || || ||||| Sbjct 112218 GGGTAAGATCACTTCCATGCATTTCGCCGGCTGGAAGCTCGGTTTGAAGACCGGCATGTA 112159 Query 113324 TTACCTCCG 113332 ||||| || Sbjct 112158 CTACCTTCG 112150 >seq6 Length=114070 Score = 138 bits (152), Expect = 1e-27 Identities = 168/224 (75%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 102168 ||||||||| || | ||||| || || |||||| | |||||| | | | |||| | | Sbjct 15159 AGTTCCATGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCTCAGACAAGAACTC 15218 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 | ||||| | || ||| |||| ||||| |||||||||||||||||| || | Sbjct 15219 CA-CTTTTGCCAACCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCT 15277 Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287 | ||| ||| | || | |||||||||||||| ||||| ||||||||||| ||||||| Sbjct 15278 CTTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCC 15336 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||| ||||| ||||||||||| | ||| || ||||| Sbjct 15337 AACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGC 15380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738745379120