Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq113 107 1e-18 >seq113 Length=382967 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||||||||| ||||| || || | || |||| ||| Sbjct 361531 ACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCC 361590 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| ||||| || || || |||||||| | || | |||||||| || Sbjct 361591 AGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGG 361650 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| ||||||| | || | || | ||| || || | || ||||| ||| Sbjct 361651 ATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCTACTTCTAGCGTGATGGTCTTT 361710 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| ||||| || ||||||||||| Sbjct 361711 CCAGTGAGCGTCTTGACGAAGATCTGCAT 361739 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || | || || ||||| || |||||||| Sbjct 361777 TCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAG 361836 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 361837 ATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 361896 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | || ||||| || || ||||| ||||| || Sbjct 361897 TCGATTGTGTCGGATGACTCTACTTCAAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACG 361956 Query 34971 AAGATCTGCATA 34982 |||||||||||| Sbjct 361957 AAGATCTGCATA 361968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631736501688