Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq168 109 4e-18 >seq168 Length=321351 Score = 109 bits (120), Expect = 4e-18 Identities = 119/157 (76%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 550381 TGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAAC 550439 ||| |||||| || | | | || || | ||||| || || || || || ||||| || | Sbjct 102956 TGGGCAAGAACGTCAAGAACGCCGTCGTCACTGTTCCCGCCTACTTCAACGACTCCCAGC 103015 Query 550440 GTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATG 550499 |||||||||| || || ||||| | |||||||| || ||||| |||||| | |||| | Sbjct 103016 GTCAAGCTACCAAGGACGCTGGTCAGATTGCTGGTCTGAATGTCCTTCGTGTCGTCAACG 103075 Query 550500 AACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 | ||||| |||||||| ||||| || || ||||| || Sbjct 103076 AGCCTACCGCTGCTGCCCTTGCTTACGGTCTTGACAA 103112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029271091395790