Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq465 260 2e-64
seq6 114 2e-20
>seq465
Length=132516
Score = 260 bits (288), Expect = 2e-64
Identities = 1106/1735 (64%), Gaps = 23/1735 (1%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
||||||| ||||| ||||||| ||||| | |||||||| || ||||||||||| |
Sbjct 113874 CCCACAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGCGAAGACATTGAGAAGGC 113815
Query 75271 CTTGGAGACATACGACAAGATGTC-CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| | ||||| |||||| | ||||| | || ||| |||| || || | || || || |
Sbjct 113814 CATTGAGACCTACGACTACATGTCGCAAAAGTA-CTTCACACATGCCTCGCCTACGCTGT 113756
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| || || || || | || |||||||| |||||||| |||| || |||||||
Sbjct 113755 TCAACGCGGGAACGCCCAACCCTCAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGG 113696
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| ||| |||||||||| | || || | | ||||||| ||||| ||| ||||
Sbjct 113695 ACAGCATCGACGGTATCTACGACACACTGAAGACGTGTGCGTTGATCTCCAAGACCGCTG 113636
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| || ||||| | | | || | | |||| || ||| | || || |
Sbjct 113635 GCGGCATTGGACTCAATGTGCACCGCATCCGTGCCACCGGCTCCTACATTGGTGGCACCA 113576
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| || ||| ||||| | || || ||||| || || | ||| ||| || ||||| |
Sbjct 113575 ACGGAACATCCAATGGTCTCATCCCGATGCTCCGTGTCTACAACAACACCGCTCGCTACG 113516
Query 75570 TAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625
| ||| || | ||| ||| || | |||| ||||| | || ||||||||
Sbjct 113515 TCGATC-AGGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACCTCGAGCCATGGCAC 113457
Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685
|| ||| | | | |||||||| |||| ||||| ||| | ||||||| || |
Sbjct 113456 GCGGATGTATTCGGCTTCCTTGACCTACGCAAGAACCACGGTAAGGAAGAGGTACGAGCT 113397
Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745
| || ||||| | |||| |||||||| || || ||||||||||| || | |||
Sbjct 113396 CGTGACCTCTTCTACGCCCTCTGGATTCCCGATCTCTTCATGAAGCGAGTGCAAGAGAAC 113337
Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805
|| | ||| | || | || || || || || ||||| |||||| || ||
Sbjct 113336 GGCGAGTGGACACTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACGGCGAT 113277
Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865
||||| || | |||||||| || || ||| | | | |||||| |
Sbjct 113276 GAGTTCGAGGAGCTCTACACCCGTTACGAGCGCGAGAACAAGGGTCGCGAGACTGTTCGT 113217
Query 75866 GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924
||| | || | | ||| | || |||||| | | ||||| |||||||| | || | ||
Sbjct 113216 GCC-CAGAAGCTCTGGTACGCCATTCTCGAGGCGCAGACTGAGACTGGCAACCCGTTCAT 113158
Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984
||| |||||||| ||||| |||| |||| ||||| ||||| | || || || ||
Sbjct 113157 GCTGTACAAGGACGCTTGCAACAGGAAGTCCAACCAGAAGAACCTCGGTACCATTCGCAG 113098
Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044
||| || || ||||| || ||| | |||| ||| | | |||||| || || |||||
Sbjct 113097 CTCCAACCTCTGCACTGAGATTGTCGAGTTCACTGCTCCTGATGAGGTCGCCGTGTGCAA 113038
Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGA 76104
|||| || ||||||||||| | |||| | | || | || || || | |
Sbjct 113037 CCTGGCTTCCCTCGCCCTTCCATCCTTTGTCGACTACAAGCGTGGCGAGTTCGACTTCCA 112978
Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164
|| || || || | || | | | || || || || ||| |||| || ||
Sbjct 112977 CAAGCTCCACGAGGTGACCATGGTCGTCACACGTAACCTCAACAAGATCATCGAGGTCAA 112918
Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224
|| || || ||| || || ||| | || || || || || ||| | ||
Sbjct 112917 CCACTACCCTGTGGAGGAGGCACGCCGCAGCAATTTCCGCCATAGGCCCATCGGTCTTGG 112858
Query 76225 TGTTCAAGGTCTCGCGGATGTATTTAT-----TTTGTGCCGCTACGCATTTGATTCAGAT 76279
|||||| ||||| || |||| || | || || | || | ||||| || |
Sbjct 112857 TGTTCAGGGTCTTGCTGATGCTTTCCTCGCCCTTCGT-CTGC----CTTTTGAGTCGACT 112803
Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339
||||||||| || | || | | ||||| || || || || ||||| | || | ||
Sbjct 112802 GAAGCCAAGAAGCTCAACACCCAGATCTTCGAGACAATTTACCACGCGGCTCTCACGTCG 112743
Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399
|| || | || | | | ||| | |||| |||| |||||||| || | ||||
Sbjct 112742 TCCTGCGATATCGCCAAGGAGCTTGGTCCATATGCTACATACGAGGGTTCGCCTGTGTCC 112683
Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGG 76457
| || |||||||| ||| | |||| |||| || || | | | |||||||
Sbjct 112682 AAGGGTCAGCTTCAGTACGATCTCTGGG-GCGTGACTCC-TTCTGACCTTTGGGACTGGG 112625
Query 76458 ATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 76517
| | ||||| ||| || | ||| | || ||| ||| || | || || |
Sbjct 112624 CTTCGTTGAAGGACAAGATCGCTCAGCATGGTGTGCGCAACTCTCTCCTGGTTGCGCCCA 112565
Query 76518 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAA 76577
|||| || ||||| || | || || | || || || || ||||| || ||||||||
Sbjct 112564 TGCCTACTGCCTCGACTTCGCAGATTCTTGGAAACAACGAGTGCTTCGAGCCATACACCT 112505
Query 76578 CAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCG 76637
| ||||||||| | | || || |||||||| | |||||| |||
Sbjct 112504 CGAACATCTACTCACGTCGTGTGCTGGCTGGTGAGTTCCAGGTCGTCAACCCTTGGCTCC 112445
Query 76638 TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAG 76697
|||| |||||| | || ||||||||||| || | |||||| | | || | ||
Sbjct 112444 TCAAGGACCTCGTCGACATGGGTCTCTGGTCTGAGAACATGAAGAACCGTATCATTGCAG 112385
Query 76698 CGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCA 76757
||||||||||| || | ||| | | |||||||| || | ||||| || ||| |
Sbjct 112384 ATGGTGGTTCCATCCAGAGGATCCCCAACATCCCAGAAGAGACCAAGACCCTTTACAAGA 112325
Query 76758 CAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCA 76817
| || ||||||||| | | |||| | ||||| || || || ||| |||||
Sbjct 112324 CCGTATGGGAAATCTCGCAGCGTACCATCATCCAGATGGCTGCTGACCGCGGTGCCTTCA 112265
Query 76818 TTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTT 76877
| |||||| ||| |||| | |||| | || || ||| ||| || |||
Sbjct 112264 TCGATCAATCTCAGTCATTGAACATCCACATGAAGGAGCCCACCATGGGTAAGATCACTT 112205
Query 76878 CTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932
| |||||| | || ||||| | || | || ||||| |||||||| || ||
Sbjct 112204 CCATGCATTTCGCCGGCTGGAAGCTCGGTTTGAAGACCGGCATGTACTACCTTCG 112150
>seq6
Length=114070
Score = 114 bits (126), Expect = 2e-20
Identities = 333/506 (66%), Gaps = 24/506 (5%)
Strand=Plus/Plus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081
|||||||| | ||||| | || ||| | | | |||| ||| | | || ||| | ||
Sbjct 15175 AAGAAGGCCGACTGGGCTCTCAAGTGGATCTCAGACAAGAACTC-CACTTTTGCCAACCG 15233
Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTT 65140
|| | || ||||| || ||||||||||||||| ||| || ||| ||| | || |
Sbjct 15234 TCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCTCTTTC-GCGTCCATCT 15292
Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200
||| | |||||||| ||||| |||||||| || |||||| || || || || ||||
Sbjct 15293 TCTGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCCAACGAGCTCATCTCCC 15352
Query 65201 GAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATA--- 65257
| || ||||| | ||| || ||||| ||||||| || | | || |
Sbjct 15353 GTGACGAGGGCATGCACACCGACTTTGCATGCCTGCTCTTC---TCTCTTCTCAACACCC 15409
Query 65258 GACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGT 65317
| |||| | || | || | |||||| | | ||||| |||||||||||| | | ||
Sbjct 15410 GCCCCAGCAAGGATGCCGTCAAGGCCATCATCACCGAGGCTGTTGAGATTGAGCAGGAGT 15469
Query 65318 TCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGT 65377
|| || || || ||||| || ||| |||| ||||| || |||| | |||
Sbjct 15470 TCCTCACCGAAGCTCTCCCCTGCGCTCTGCTCGGCATGAATTCCACCCTCATGTGCCAGT 15529
Query 65378 ACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-----GGTGCCACCCA--TT 65430
|||| |||| || | || || || || ||||| || |||| | |
Sbjct 15530 ACATCGAGTTCGTCGCTGACCGCCTGCT-------GTTGGCCCTTGGCAACACCAAGGTC 15582
Query 65431 TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAAC 65490
| ||||| | || || || ||||| ||||| ||||| || | || |||||||||
Sbjct 15583 TACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGCGGGCAAGACCAAC 15642
Query 65491 TTCTTTGAGAAGCGAGTTGGGGACTA 65516
||||| |||||||| || || || ||
Sbjct 15643 TTCTTCGAGAAGCGCGTCGGCGATTA 15668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596566087696480
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