Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq465 260 2e-64 seq6 114 2e-20 >seq465 Length=132516 Score = 260 bits (288), Expect = 2e-64 Identities = 1106/1735 (64%), Gaps = 23/1735 (1%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||||||| ||||| ||||||| ||||| | |||||||| || ||||||||||| | Sbjct 113874 CCCACAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGCGAAGACATTGAGAAGGC 113815 Query 75271 CTTGGAGACATACGACAAGATGTC-CCAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | ||||| |||||| | ||||| | || ||| |||| || || | || || || | Sbjct 113814 CATTGAGACCTACGACTACATGTCGCAAAAGTA-CTTCACACATGCCTCGCCTACGCTGT 113756 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| || || || || | || |||||||| |||||||| |||| || ||||||| Sbjct 113755 TCAACGCGGGAACGCCCAACCCTCAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGG 113696 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || ||| |||||||||| | || || | | ||||||| ||||| ||| |||| Sbjct 113695 ACAGCATCGACGGTATCTACGACACACTGAAGACGTGTGCGTTGATCTCCAAGACCGCTG 113636 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | || ||||| | | | || | | |||| || ||| | || || | Sbjct 113635 GCGGCATTGGACTCAATGTGCACCGCATCCGTGCCACCGGCTCCTACATTGGTGGCACCA 113576 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || ||| ||||| | || || ||||| || || | ||| ||| || ||||| | Sbjct 113575 ACGGAACATCCAATGGTCTCATCCCGATGCTCCGTGTCTACAACAACACCGCTCGCTACG 113516 Query 75570 TAAATCAAGCGGGGC----GTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 | ||| || | ||| ||| || | |||| ||||| | || |||||||| Sbjct 113515 TCGATC-AGGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACCTCGAGCCATGGCAC 113457 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 || ||| | | | |||||||| |||| ||||| ||| | ||||||| || | Sbjct 113456 GCGGATGTATTCGGCTTCCTTGACCTACGCAAGAACCACGGTAAGGAAGAGGTACGAGCT 113397 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | || ||||| | |||| |||||||| || || ||||||||||| || | ||| Sbjct 113396 CGTGACCTCTTCTACGCCCTCTGGATTCCCGATCTCTTCATGAAGCGAGTGCAAGAGAAC 113337 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 || | ||| | || | || || || || || ||||| |||||| || || Sbjct 113336 GGCGAGTGGACACTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACGGCGAT 113277 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865 ||||| || | |||||||| || || ||| | | | |||||| | Sbjct 113276 GAGTTCGAGGAGCTCTACACCCGTTACGAGCGCGAGAACAAGGGTCGCGAGACTGTTCGT 113217 Query 75866 GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATAT 75924 ||| | || | | ||| | || |||||| | | ||||| |||||||| | || | || Sbjct 113216 GCC-CAGAAGCTCTGGTACGCCATTCTCGAGGCGCAGACTGAGACTGGCAACCCGTTCAT 113158 Query 75925 GCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAG 75984 ||| |||||||| ||||| |||| |||| ||||| ||||| | || || || || Sbjct 113157 GCTGTACAAGGACGCTTGCAACAGGAAGTCCAACCAGAAGAACCTCGGTACCATTCGCAG 113098 Query 75985 CTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAA 76044 ||| || || ||||| || ||| | |||| ||| | | |||||| || || ||||| Sbjct 113097 CTCCAACCTCTGCACTGAGATTGTCGAGTTCACTGCTCCTGATGAGGTCGCCGTGTGCAA 113038 Query 76045 TTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGA 76104 |||| || ||||||||||| | |||| | | || | || || || | | Sbjct 113037 CCTGGCTTCCCTCGCCCTTCCATCCTTTGTCGACTACAAGCGTGGCGAGTTCGACTTCCA 112978 Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 || || || || | || | | | || || || || ||| |||| || || Sbjct 112977 CAAGCTCCACGAGGTGACCATGGTCGTCACACGTAACCTCAACAAGATCATCGAGGTCAA 112918 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || || || ||| || || ||| | || || || || || ||| | || Sbjct 112917 CCACTACCCTGTGGAGGAGGCACGCCGCAGCAATTTCCGCCATAGGCCCATCGGTCTTGG 112858 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTAT-----TTTGTGCCGCTACGCATTTGATTCAGAT 76279 |||||| ||||| || |||| || | || || | || | ||||| || | Sbjct 112857 TGTTCAGGGTCTTGCTGATGCTTTCCTCGCCCTTCGT-CTGC----CTTTTGAGTCGACT 112803 Query 76280 GAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCG 76339 ||||||||| || | || | | ||||| || || || || ||||| | || | || Sbjct 112802 GAAGCCAAGAAGCTCAACACCCAGATCTTCGAGACAATTTACCACGCGGCTCTCACGTCG 112743 Query 76340 AGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCC 76399 || || | || | | | ||| | |||| |||| |||||||| || | |||| Sbjct 112742 TCCTGCGATATCGCCAAGGAGCTTGGTCCATATGCTACATACGAGGGTTCGCCTGTGTCC 112683 Query 76400 CAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TACGACTGGG 76457 | || |||||||| ||| | |||| |||| || || | | | ||||||| Sbjct 112682 AAGGGTCAGCTTCAGTACGATCTCTGGG-GCGTGACTCC-TTCTGACCTTTGGGACTGGG 112625 Query 76458 ATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 76517 | | ||||| ||| || | ||| | || ||| ||| || | || || | Sbjct 112624 CTTCGTTGAAGGACAAGATCGCTCAGCATGGTGTGCGCAACTCTCTCCTGGTTGCGCCCA 112565 Query 76518 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAA 76577 |||| || ||||| || | || || | || || || || ||||| || |||||||| Sbjct 112564 TGCCTACTGCCTCGACTTCGCAGATTCTTGGAAACAACGAGTGCTTCGAGCCATACACCT 112505 Query 76578 CAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCG 76637 | ||||||||| | | || || |||||||| | |||||| ||| Sbjct 112504 CGAACATCTACTCACGTCGTGTGCTGGCTGGTGAGTTCCAGGTCGTCAACCCTTGGCTCC 112445 Query 76638 TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAG 76697 |||| |||||| | || ||||||||||| || | |||||| | | || | || Sbjct 112444 TCAAGGACCTCGTCGACATGGGTCTCTGGTCTGAGAACATGAAGAACCGTATCATTGCAG 112385 Query 76698 CGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCA 76757 ||||||||||| || | ||| | | |||||||| || | ||||| || ||| | Sbjct 112384 ATGGTGGTTCCATCCAGAGGATCCCCAACATCCCAGAAGAGACCAAGACCCTTTACAAGA 112325 Query 76758 CAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCA 76817 | || ||||||||| | | |||| | ||||| || || || ||| ||||| Sbjct 112324 CCGTATGGGAAATCTCGCAGCGTACCATCATCCAGATGGCTGCTGACCGCGGTGCCTTCA 112265 Query 76818 TTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTT 76877 | |||||| ||| |||| | |||| | || || ||| ||| || ||| Sbjct 112264 TCGATCAATCTCAGTCATTGAACATCCACATGAAGGAGCCCACCATGGGTAAGATCACTT 112205 Query 76878 CTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932 | |||||| | || ||||| | || | || ||||| |||||||| || || Sbjct 112204 CCATGCATTTCGCCGGCTGGAAGCTCGGTTTGAAGACCGGCATGTACTACCTTCG 112150 >seq6 Length=114070 Score = 114 bits (126), Expect = 2e-20 Identities = 333/506 (66%), Gaps = 24/506 (5%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| | || ||| | | | |||| ||| | | || ||| | || Sbjct 15175 AAGAAGGCCGACTGGGCTCTCAAGTGGATCTCAGACAAGAACTC-CACTTTTGCCAACCG 15233 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTT 65140 || | || ||||| || ||||||||||||||| ||| || ||| ||| | || | Sbjct 15234 TCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCTCTTTC-GCGTCCATCT 15292 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 ||| | |||||||| ||||| |||||||| || |||||| || || || || |||| Sbjct 15293 TCTGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCCAACGAGCTCATCTCCC 15352 Query 65201 GAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATA--- 65257 | || ||||| | ||| || ||||| ||||||| || | | || | Sbjct 15353 GTGACGAGGGCATGCACACCGACTTTGCATGCCTGCTCTTC---TCTCTTCTCAACACCC 15409 Query 65258 GACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGT 65317 | |||| | || | || | |||||| | | ||||| |||||||||||| | | || Sbjct 15410 GCCCCAGCAAGGATGCCGTCAAGGCCATCATCACCGAGGCTGTTGAGATTGAGCAGGAGT 15469 Query 65318 TCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGT 65377 || || || || ||||| || ||| |||| ||||| || |||| | ||| Sbjct 15470 TCCTCACCGAAGCTCTCCCCTGCGCTCTGCTCGGCATGAATTCCACCCTCATGTGCCAGT 15529 Query 65378 ACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-----GGTGCCACCCA--TT 65430 |||| |||| || | || || || || ||||| || |||| | | Sbjct 15530 ACATCGAGTTCGTCGCTGACCGCCTGCT-------GTTGGCCCTTGGCAACACCAAGGTC 15582 Query 65431 TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAAC 65490 | ||||| | || || || ||||| ||||| ||||| || | || ||||||||| Sbjct 15583 TACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGCGGGCAAGACCAAC 15642 Query 65491 TTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||| |||||||| || || || || Sbjct 15643 TTCTTCGAGAAGCGCGTCGGCGATTA 15668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566087696480