Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq418 241 2e-58 seq113 152 7e-32 seq427 141 1e-28 seq378 122 1e-22 seq168 114 2e-20 seq43 96.9 5e-15 >seq418 Length=238847 Score = 241 bits (266), Expect = 2e-58 Identities = 468/689 (68%), Gaps = 3/689 (0%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || |||||||| | || || || ||||| || || ||| | | | || || Sbjct 75977 GCGATCGGTATCGACCTGGGTACCACGTACTCTTGCGTCGGTATCTTCAGGGACGACCGC 76036 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 | ||||| ||| | |||||||| || ||||| ||||| || |||| ||||||||| || Sbjct 76037 ATTGAGATCATCGCCAATGACCAGGGTAACCGCACAACGCCCTCGTTCGTTGCCTTCACC 76096 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || |||||| | ||||| | || || || ||| || |||||||| ||| Sbjct 76097 GACACCGAGCGTCTCATCGGAGACTCTGCGAAGAACCAGGTCGCCATGAACCCCGCCAAC 76156 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||||||||| ||||| || || || |||||||| | ||| | || || | Sbjct 76157 ACAGTCTTTGACGCAAAGCGCCTCATCGGCCGCAAGTTCGCCGATGCTGAGGTTCAGGCT 76216 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||| | | | ||| || || | || | |||||| | || | Sbjct 76217 GACATGAAGCACTTCCCCT-TCAAG--GTCATCGATAAGGGCGGCAAGCCTGTCATCCAG 76273 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 | || || | || ||| |||| || | || || || || || || ||||| | Sbjct 76274 ATCGAGTTCAAGGGCGAGGAGAAGACTTTCACACCTGAGGAGATCTCATCCATGGTCCTC 76333 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 | ||||||| ||| || || || || | | | ||| || || || | || ||||| Sbjct 76334 ACCAAGATGAGGGAAACCGCAGAGTCCTACCTCGGTGGCACCGTCAACAACGCCGTTGTC 76393 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || |||||||||| || || || || ||||| || |||||||| | | || Sbjct 76394 ACTGTTCCCGCTTACTTCAACGACTCCCAGCGTCAGGCTACCAAGGACGCAGGTCTCATC 76453 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || ||||| || || ||||| || || || || || ||| Sbjct 76454 GCCGGCCTCAACGTCCTCCGTATCATCAACGAGCCCACAGCTGCCGCCATCGCCTACGGT 76513 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 || |||||||| | | | || || || | ||||| || || ||||| ||||| Sbjct 76514 CTTGACAAGAAGACCCAAGGTGAGCGCAACGTCCTCATCTTCGACCTGGGTGGCGGTACC 76573 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || |||||||| || || | || || | ||||| ||||| || ||| ||||||| ||| Sbjct 76574 TTCGATGTCTCGCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCTACTGCCGGT 76633 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987 || ||||| | |||||||| || ||||| Sbjct 76634 GACACTCACTTGGGTGGTGAGGACTTCGA 76662 >seq113 Length=382967 Score = 152 bits (168), Expect = 7e-32 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || || || || || || ||||| || || || |||| Sbjct 361972 GTGGTATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGCTTGAAGTAGAGT 361913 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||||||||| ||| |||| |||||| || || ||||| |||||||| || | Sbjct 361912 CATCCGACACAATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGG 361853 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || | || ||||| || || |||||||| || || || || || | || | Sbjct 361852 ACCAGCAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTGTCGGACT 361793 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||| | || |||||||| |||||||| || || || Sbjct 361792 ACAACATCCAGAAGGAGTCCACTCTACATCTCGTGCT 361756 Score = 93.3 bits (102), Expect = 6e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 171954 AGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGA 172013 ||| ||||| |||||||| || || ||||| || | || || || || ||||||||||| Sbjct 362103 AGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTTGATCTTCGCCGGCAAACAGCTTGA 362044 Query 172014 AGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || || ||||| | || |||||| | || |||||||| || || ||||| || || Sbjct 362043 GGACGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACGCTCCACCTGGTCCT 361984 Query 172074 AAGGCTTCGGGGTGGT 172089 | || || |||||| Sbjct 361983 CCGTCTCCGCGGTGGT 361968 >seq427 Length=214910 Score = 141 bits (156), Expect = 1e-28 Identities = 233/333 (70%), Gaps = 11/333 (3%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGA-ATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGAC 195720 ||||||||||||| ||| || | || || | || | | ||||| | || ||||| || Sbjct 198646 AAGATGAAGGAGATTGCTGAGAGCTATC-TCGGCGAGCCCGTGAAGAACGCTGTTGTCAC 198588 Query 195721 TGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGC 195780 || || || ||||||| || | || || || ||||||||||||| |||| || Sbjct 198587 CGTTCCCGCCTACTTCAACGACGCCCAGCGTGCCGCCACAAAGGACGCTGGCACTATCGC 198528 Query 195781 GGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 ||||| ||| ||| | || |||| || || || |||||||| | || || ||||| Sbjct 198527 CGGTCTCAACGTTCTCCGTGTTGTCAACGAGCCCACTGCGGCTGCTTTGGCCTACGGTCT 198468 Query 195841 GGACAAGA------ACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 |||||| |||||| ||| | || | ||| |||||| |||||||| Sbjct 198467 CGACAAGGTCGCCGACAAGGGCGAGCGCCAG---GTTCTCGTCTATGATCTTGGTGGTGG 198411 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||| || ||||| || |||||| ||| || ||||| ||||| || || |||| || Sbjct 198410 TACTTTCGATGTGTCCATTCTCACTATCGAGTCGGGTATTTTCGAGGTTCAGTCTACCGC 198351 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||||| || ||||| |||||||| ||||| || Sbjct 198350 TGGTGACACCCATCTTGGTGGTGAGGATTTTGA 198318 >seq378 Length=255854 Score = 122 bits (134), Expect = 1e-22 Identities = 254/374 (68%), Gaps = 6/374 (2%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || ||||| || |||||||||| || |||||||| || |||||||| | ||| | Sbjct 44920 GCCCTCCGTCGTCTCCGGACTGCATGCGAGCGTGCCAAGCGTACTCTCTC--CAACGCCA 44863 Query 196121 C--AAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTA 196178 | | || | |||||||| || ||| |||| ||||| |||||| | | | || | Sbjct 44862 CCCAGACCACTGTTGAGATCGACTCGCTGTTCGACGGTGAGGACTTCAACGCCAACATCA 44803 Query 196179 CCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTG-TATGGAACCTGTT 196237 ||||||| ||||| || || || ||| | || ||| | | | | || |||||| Sbjct 44802 CCCGTGCTCGTTTCGAGGACTTGAAC-CAGAAGGCTTTCGCCGGCACTCTTGACCCTGTT 44744 Query 196238 GAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTG 196297 | || || || ||||| || || | ||| |||||||| || || || || || Sbjct 44743 GCTCAGGTTCTCAAGGACGCCAACATTGCCAAGGAGAAGGTTGACGAGATCGTTCTCGTT 44684 Query 196298 GGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAA 196357 || || || |||||||| || ||||| || || | || ||||||| | || Sbjct 44683 GGTGGCTCCACCCGTATCCCCAAGATCCAGAAGCTCCTCAGCGACTTCTTCGGTGGCAAG 44624 Query 196358 GATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCT 196417 | | | || | |||||||| || || || ||||| || ||||| ||||||||||| Sbjct 44623 AAGCTCGAGAAGAGCATCAACCCCGACGAGGCTGTTGCCTACGGTGCCGCCGTTCAGGCC 44564 Query 196418 GCTATTCTCTCAGG 196431 | ||| ||||| || Sbjct 44563 GGTATCCTCTCCGG 44550 Score = 118 bits (130), Expect = 1e-21 Identities = 192/273 (70%), Gaps = 5/273 (2%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| || || || || || || |||||||| | ||| ||| Sbjct 45319 ACCGTGCCCGCCTACTTCAACGACAACCAGCGTCAAGCTACCAAGGACGCCGGTGCCATT 45260 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || || || || || || || ||||| ||| Sbjct 45259 GCTGGCCTCAACGTTCTCCGTATCATCAACGAGCCTACCGCCGCAGCTATCGCTTACGGT 45200 Query 195839 CT-GGACAAGAACAAGGACGAA---GATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 || || | | ||| ||| || | || || | |||| |||||||||||||| Sbjct 45199 CTCGGTTCCGGA-AAGTCCGAGAAGGAGAGGAACGTCCTCATCTACGATCTCGGTGGTGG 45141 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||| || ||||| || ||||| | ||| | |||||| | ||| || ||||| || || Sbjct 45140 TACTTTCGATGTGTCTCTTCTGCACATTCAGGGTGGTGTCTTCACTGTCAAGGCCACCGC 45081 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||||| || ||| | ||||| |||||||||| Sbjct 45080 TGGTGACACCCATTTGGGTGGACAAGATTTCGA 45048 >seq168 Length=321351 Score = 114 bits (126), Expect = 2e-20 Identities = 223/327 (68%), Gaps = 8/327 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || || | |||||| || | || || | || || || ||| Sbjct 102928 AAGATGAAGGAGACTGCCGAGTCCTACATGGGCAAGAACGTCAAGAACGCCGTCGTCACT 102987 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || || || || |||||||||| | ||||| Sbjct 102988 GTTCCCGCCTACTTCAACGACTCCCAGCGTCAAGCTACCAAGGACGCTGGTCAGATTGCT 103047 Query 195782 GGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 ||||| || ||| ||| | | |||| || || || || ||||| ||||||| ||||| Sbjct 103048 GGTCTGAA-TGTCCTTCGTGTCGTCAACGAGCCTACCGCTGCTGCCCTTGCTTACGGTCT 103106 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 |||||| || || | | || ||| |||||||| ||||| || || Sbjct 103107 TGACAAGGCCACCGATGCCG------TCGTCGCTGTCTACGATCTCGGAGGTGGCACATT 103160 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||| | || | ||| | ||| | || | || || || ||| | || ||||| Sbjct 103161 CGATATTTCCATCCTCGAGATTCAGAACGGCGTCTTTGAGGTCAAGTCCACCAACGGTGA 103220 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| || |||||||| || ||||| Sbjct 103221 CACTCACCTTGGTGGTGAGGACTTCGA 103247 >seq43 Length=72025 Score = 96.9 bits (106), Expect = 5e-15 Identities = 219/320 (68%), Gaps = 12/320 (4%) Strand=Plus/Minus Query 198456 GATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTTCTTAAA 198515 || |||| || || ||| |||||| | || | |||| |||||| ||| ||||| Sbjct 59647 GACGTTGCAGGCATGGACGAGGCTAAGCAAGAAATTATGGAGTTTGTTGCTTTCCTTAAG 59588 Query 198516 AACCCCGAAAAGTACTATGGAAG--TGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCG 198573 |||| | | | | |||| ||||||| ||||| ||||| || | || | | Sbjct 59587 GACCCTGGGCGTTTCCA--GAAGCTTGGTGCCAAGATCCCTCGTGGCGCCATCCTGTCTG 59530 Query 198574 GTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCC 198633 | | || ||||| ||||| || || || || || | || || || || |||| | Sbjct 59529 GCCCTCCAGGTACCGGTAAGACACTACTGGCCAAGGCCACAGCTGGCGAGTCTGGTGTGC 59470 Query 198634 CCTTTCTTCAGTGCTCCGCGGC---GAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTA 198690 |||| ||| |||| | | ||| ||||| | |||| |||||||| ||||||||||| Sbjct 59469 CCTT-CTTTAGTG-TGAGTGGCTCCGAGTT-CGTCGAAATGTTCGTCGGTGTTGGTGCAT 59413 Query 198691 AGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAATCA-ACCATGTATCATCTTCATT 198749 ||| || || || ||||| | | || || || | || ||| || ||||||||||| Sbjct 59412 CGCGTGTGCGAGATCTCTTCGCCAACGCGCGC-AAGAGCACACCGTGCATCATCTTCATC 59354 Query 198750 GATGAGATTGACGCTGTTGG 198769 || |||||||||||| |||| Sbjct 59353 GACGAGATTGACGCTATTGG 59334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657858526835120