Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq113 86.0 1e-11 >seq113 Length=382967 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 171861 ACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCC 171920 || || || | ||| | ||| || ||| || || || || | || || | || ||| Sbjct 361531 ACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCC 361590 Query 171921 AATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGT 171980 | || || |||||||| || | | ||| ||||| || || || || || ||||| || Sbjct 361591 AGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGG 361650 Query 171981 ATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTA 172040 || || ||| || || || ||||| || || ||||||||||| || ||||| || Sbjct 361651 ATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCTACTTCTAGCGTGATGGTCTTT 361710 Query 172041 CCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || || | ||| ||||||||| Sbjct 361711 CCAGTGAGCGTCTTGACGAAGATCTGCATT 361740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905130671011800