Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq465 347 1e-90
seq6 174 2e-38
seq113 125 7e-24
seq267 87.8 2e-12
>seq465
Length=132516
Score = 347 bits (384), Expect = 1e-90
Identities = 1015/1545 (66%), Gaps = 49/1545 (3%)
Strand=Plus/Plus
Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319
|| || ||||| ||||| || || ||||| || || || | ||| || | ||
Sbjct 112456 TTGACGACCTGGAACTCACCAGCCAGCACACGACGTGAGTAGATGTTCGAGGTGTATGGC 112515
Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379
|| || |||||||||| || | |||||||| |||| || || |||||| ||| |||
Sbjct 112516 TCGAAGCACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAACC 112575
Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439
|| || |||||||||| ||| | | || ||| ||||| | |||||||||||
Sbjct 112576 AGGAGAGAGTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACGAAGCCCAGTCCCAA 112635
Query 148440 AGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGC--GGCTAGCGGGGC 148497
|| || || |||||| ||| | |||||||| || || | | || | || |
Sbjct 112636 AGGTCAGAAGGAGTCACGCCCCAGAGATCGTACTGAAGC-TGACCCTTGGACACAGGCGA 112694
Query 148498 TGCCCTCGTACG-AGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGC 148556
|||||||| | ||| || || || || || || | |||||| || | |||
Sbjct 112695 A-CCCTCGTATGTAGCA-TATGGACCAAGCTCCTTGGCGATATCGCAGGACGACGTGAGA 112752
Query 148557 GCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCG-ACTCGCTTTC 148615
|| ||| |||||| |||||| || || |||||||| | || | ||| | |
Sbjct 112753 GCCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTTGGCTTCAGTCGACT-C 112811
Query 148616 GTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGG 148675
| |||| ||| || | || || || ||||| ||||| || || | || |||||
Sbjct 112812 AAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAACACCAAGACCGATGGG 112871
Query 148676 CCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGAT 148735
|| || | ||| | |||| || ||| | || ||||||||| ||||||||
Sbjct 112872 CCTATGGCGGAAATTGCTGCGGCGTGCCTCCTCCACAGGGTAGTGGTTGACCTCGATGAT 112931
Query 148736 CTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGC------AATTCAAAATC 148789
||||| || || || || ||| | || | | | ||| || || || ||
Sbjct 112932 CTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCTTGTGGAAGTCGAACTC 112991
Query 148790 GTA---CTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGC 148846
| ||||| || || | | || | | ||||| || || || |||||||||||
Sbjct 112992 GCCACGCTTGTAGTCGACAAAGGATGGA---AGGGCGAGGGAAGCCAGGTTGCACACGGC 113048
Query 148847 CGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTG---CTGCATTTGAT 148903
|||||| || || || |||| || ||||| | ||| || ||| |||| || |
Sbjct 113049 GACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGGAGCTGCGAATGGT 113108
Query 148904 CACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
|| | |||||| || ||| ||| |||||||| |||||||||||||||||| ||||
Sbjct 113109 ACCG---AGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGCATGAACGG 113165
Query 148964 TCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGATGCAGGTC--CTGCGCGCGCACT 149021
|||||| || ||||| || | ||| || ||| | ||| || || ||
Sbjct 113166 GTTGCCAGTCTCAGTCTGCGCCTCGAGAATGG--CGTACCAGAGCTTCTGGGCACGAACA 113223
Query 149022 TGCTGCTCGTAGCGACCCTCCT------GCTCGTATAAAGTATACAGCCGCTCGAACGCC 149075
|| |||||||| | ||||||| || || ||| ||||||| |
Sbjct 113224 GTCTC------GCGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTCGAACTCA 113277
Query 149076 TCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCG 149135
||||||||| ||| | ||||| ||||||| || ||||||||||| | |||| |||||
Sbjct 113278 TCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCG 113337
Query 149136 TCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGC 149195
| | | | ||| |||||||| || |||||||| | |||||| ||||| | |||||| ||
Sbjct 113338 TTCTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCACGA 113397
Query 149196 GC-CTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGC 149254
|| | | | ||||| || ||| ||| |||| || | || ||||| |||||
Sbjct 113398 GCTCGTAC-CTCTTCCTTACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATACATCCGC 113456
Query 149255 GTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGAC 149311
|||||| ||||| | ||| | |||| || || |||| ||||| ||||| |||||
Sbjct 113457 GTGCCATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCTGATCGAC 113516
Query 149312 GTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTT 149371
|| ||| | ||||||| | || || | ||| || | ||| ||| || |||||
Sbjct 113517 GTAGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATGTTCCGTT 113576
Query 149372 AGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCC 149431
|| | |||| |||| || || | |||||| |||| || ||||||||
Sbjct 113577 GGTGCCACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTGAGTCCAATGCCGCC 113636
Query 149432 GCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGT 149490
|| ||| ||||| ||| || ||| | || || |||||| || ||||||||||
Sbjct 113637 AGCGGTCTTGGAGATCAACGCACACGTCTTC-AGTGTGTCGTAGATACCGTCGATGCTGT 113695
Query 149491 CGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGA 149550
| ||||||| | || ||||| || |||| || || |||| || || ||
Sbjct 113696 CCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCGCGTTGA 113755
Query 149551 ACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCA 149610
||| || || ||| ||||| || || || || ||| ||||| | ||| |
Sbjct 113756 ACAGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAGTCGTAGGTCTCAATGG 113815
Query 149611 CGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTC 149670
| || ||||| |||||||||||||| | |||||| ||||| ||||| ||||| || |
Sbjct 113816 CCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGTGGGC 113875
Query 149671 GCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAA 149730
|||| || || ||| || ||| | ||| | ||||| |||||| ||||||
Sbjct 113876 GCTCTGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGCGCTCTAGCGTCTTGAAGCCAA 113935
Query 149731 AGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTCGA 149775
|| ||| ||||| ||||||||| | | ||||||| | || ||
Sbjct 113936 AGAACTGGTAGTTGAAGTCGCGGTCATATACAATGGCCGAGTTGA 113980
>seq6
Length=114070
Score = 174 bits (192), Expect = 2e-38
Identities = 357/520 (69%), Gaps = 17/520 (3%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| ||||||||||| ||||| || ||||| || |||||| | | ||| ||||| |
Sbjct 15672 CTGGTAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCGCGAGCGAGATGTTCTC 15613
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | ||||| || || | | ||| | | |||||
Sbjct 15612 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGACCTTGGTGTTGCCAAGGGCCAACAGCAG 15553
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACG 120529
||||| || || ||||| ||||||| ||||||| | || | |||||||| |||| |
Sbjct 15552 GCGGTCAGCGACGAACTCGATGTACTGGCACATGAGGGTG-GAATTCATGCCGAGCAGAG 15494
Query 120530 CCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
| || | || |||| ||||||| |||||| || || ||||| ||| ||||
Sbjct 15493 CGCAGGGGAGAGCTTCGGTGAGGAACTCCTGCTCAATCTCAACAGCCTCGGTGATGATGG 15434
Query 120590 C---GA--GCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCA 120644
| || |||| | || ||| | ||||| || | | | || ||||||
Sbjct 15433 CCTTGACGGCATCCTT--GCTGGGG--CGGGTGTT-GAGAAGAGA---GAAGAGCAGGCA 15382
Query 120645 CGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCC 120704
|||||||| ||||||| ||||||||| || || || ||||||||| || || || ||
Sbjct 15381 TGCAAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACC 15322
Query 120705 GGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACAC 120764
||||| | || | |||||| |||| |||| || || ||| ||||| |
Sbjct 15321 TGGCATCAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAAGAGCCGCTGAAGAAGAT 15262
Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-CTGTCGA 120823
||||| ||| ||||||||||| | || | ||| || || | ||||| ||| ||
Sbjct 15261 ACCCTCAACGGCAGCAAAGGCGACGAGACGGTTGGCAAAAGTGGAGTTCTTGTCTG-AGA 15203
Query 120824 TCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
||||||| | ||||| |||||||| ||||| | ||| ||
Sbjct 15202 TCCACTTGAGAGCCCAGTCGGCCTTCTTGCGGATGCATGG 15163
>seq113
Length=382967
Score = 125 bits (138), Expect = 7e-24
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516
||||| |||||||| ||||| || ||||| || || |||| |||||| |||||
Sbjct 361764 ATGTAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCAAGCTG 361823
Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
|||||| || | || | ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct 361824 CTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 361883
Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
||||| | || | ||||||| | ||| || || | |||| ||| ||||||||
Sbjct 361884 GCTCTTGACGTTGTCGATTGTGTCGGATGACTCTACTTCAAGCGTGATGGTCTTGCCGGT 361943
Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660
|| || || ||||| ||||||||
Sbjct 361944 GAGCGTCTTGACGAAGATCTGCAT 361967
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| | ||| | | | ||||| |||||||| ||
Sbjct 361543 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCA-TCCTCCAGCTGCTTTCC 361601
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| ||||||||||| |||||||| || ||||| || |||||| ||
Sbjct 361602 AGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGGATCTTCGATTT 361661
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| || |||| | ||| || || | |||| ||| || || || || ||
Sbjct 361662 GACGTTGTCAATGGTATCGGATGACTCTACTTCTAGCGTGATGGTCTTTCCAGTGAGCGT 361721
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 361722 CTTGACGAAGATCTGCAT 361739
>seq267
Length=290730
Score = 87.8 bits (96), Expect = 2e-12
Identities = 88/112 (79%), Gaps = 2/112 (2%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| || ||||| || | ||| | | | ||||||||||
Sbjct 207193 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCA-TCCTCGAGCT 207251
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567
||||||| ||| | ||||| ||||||||||| || || ||||| ||||||||
Sbjct 207252 GCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 207303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483417953860040
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