Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq113 104 2e-17 >seq113 Length=382967 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || ||||| ||| || || |||||||| |||||||| ||||| | || || Sbjct 361530 CACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTC 361589 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || ||||| ||||| || | ||||||||| || | || | ||| || || || Sbjct 361590 CAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTG 361649 Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || ||| ||| | | | |||| ||| ||| ||| || || || | |||||| || | Sbjct 361650 GATCTTCGATTTGA-CGTTGTCAATGGTATCGGATGACTCTACTTCTAGCGTGATGGTCT 361708 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||| || || ||||||||||| Sbjct 361709 TTCCAGTGAGCGTCTTGACGAAGATCTGCAT 361739 Score = 104 bits (114), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||| | |||||||||| ||| || || |||||||| || || || ||||| |||| || Sbjct 361758 CACGAGATGTAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTC 361817 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || || |||||||| ||||| |||||||| || | || | || || ||||| Sbjct 361818 AAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 361877 Query 33660 AATTTT-CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 || || || || || | ||| | |||||| ||| || || |||| |||||| || Sbjct 361878 GATCTTGCTCTTG--ACGTTGTCGATTGTGTCGGATGACTCTACTTCAAGCGTGATGGTC 361935 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || | ||| || || |||||||||||| Sbjct 361936 TTGCCGGTGAGCGTCTTGACGAAGATCTGCATA 361968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702113136320