Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq465 149 6e-31
seq113 89.7 5e-13
>seq465
Length=132516
Score = 149 bits (164), Expect = 6e-31
Identities = 972/1545 (63%), Gaps = 55/1545 (4%)
Strand=Plus/Plus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTC-TGAGATACACATTGCTAGTGAAAGG 146951
||||| || || ||||| || ||||||||||| | |||| || | || ||| | ||
Sbjct 112456 TTGACGACCTGGAACTCACCAGCCAGCACACGACGTGAG-TAGATGTTCGAGGTGTATGG 112514
Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011
||| || |||| || || || | || || | || | || ||||||||| ||| ||
Sbjct 112515 CTCGAAGCACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAAC 112574
Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071
|| | || || |||| ||| | | | ||| ||||||||||| | |||||||||
Sbjct 112575 CAGGAGAGAGTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACGAAGCCCAGTCCCA 112634
Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGC--ACTCCTCGACTGGCGGGA 147129
| || || |||||| ||| | |||||||| ||| || | | ||| |
Sbjct 112635 AAGGTCAGAAGGAGTCACGCCCCAGAGATCGTACTGAAGCTGACCCTTGGAC-------A 112687
Query 147130 CTGCCAGCGAAC----GTAGTGTAGCTTCCGTCGC--GCTGC---GCCAATTCACAGCTT 147180
| | |||||| ||| |||||| | | | ||| | || | || |||
Sbjct 112688 CAG---GCGAACCCTCGTA-TGTAGCATATGGACCAAGCTCCTTGGCGATATCGCAGGAC 112743
Query 147181 GCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCT 147240
| | ||| || | | ||| || || ||| ||| || |||| || | |||||
Sbjct 112744 GACGTGAGAGCCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTTGGCTTCA 112803
Query 147241 -TCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGAC 147299
||| ||| |||||| ||| || | || ||||| || | |||||| | ||| |
Sbjct 112804 GTCGA-CTCAAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAACACCAAG 112862
Query 147300 GCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCG 147359
||||| || | ||| |||||||| || | | | || |||||||||
Sbjct 112863 ACCGATGGGCCTATGGCGGAAATTGCTGCGGCGTGCCTCCTCCACAGGGTAGTGGTTGAC 112922
Query 147360 ATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAA 147419
|| || ||||||||||||||||| || || | || | | ||| || | |||
Sbjct 112923 CTCGATGATCTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCTTGTGGAA 112982
Query 147420 ATCATAAGTCCC-------GTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCA 147472
|| || || | || |||||| | | || | | ||||| || ||||
Sbjct 112983 GTCG-AACTCGCCACGCTTGTAGTCGACA---AAGGATGGA---AGGGCGAGGGAAGCCA 113035
Query 147473 GATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGC 147532
| ||||| ||||| ||| || | | || ||| || || || | ||| ||||||
Sbjct 113036 GGTTGCACACGGCGACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGG 113095
Query 147533 TGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGA 147592
|| ||| || | || | ||| ||| |||| ||||| ||||| ||| | |
Sbjct 113096 AGCTGCGAATGGTACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACA 113155
Query 147593 GCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGC-AGGTCCTGC 147651
||||| |||| ||| ||||| |||| || | || | || || | |||
Sbjct 113156 GCATGAACGGGTTGCCAGTCTCAGTCTGCGCCTCGAGAATGG-CGTACCAGAGCTTCTGG 113214
Query 147652 GCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAAC 147711
|| || || || ||| | |||| ||||| || ||| | | ||| |||
Sbjct 113215 GCACGAACAGTCTCGCGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTCGAAC 113274
Query 147712 TCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATG 147771
|| ||||||||| |||||||| || || |||| | || ||||| || | |||| |
Sbjct 113275 TCATCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCG 113334
Query 147772 TCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCG 147831
||| | | | || || ||| || ||||| || | ||| || ||||| | || ||
Sbjct 113335 CCGTTCTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCA 113394
Query 147832 CGCGCTT-TGCAA--TCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATG 147888
|| ||| | | |||| || | |||||| | | ||| | || | |
Sbjct 113395 CGAGCTCGTACCTCTTCCTTACCGTGGTTCTTGCGT---AGGTCAAGGAAGCCGAATACA 113451
Query 147889 TCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGG 147945
|| |||||||| || || | ||||| ||| | ||||| ||||| || |||||
Sbjct 113452 TCCGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCTGA 113511
Query 147946 TCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTG 148005
||||| | ||| | ||||||| | || || | ||| || || || | | ||
Sbjct 113512 TCGACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATGTT 113571
Query 148006 CCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATG 148065
||||||||| | || | | |||| ||| || | |||||| || | ||||||
Sbjct 113572 CCGTTGGTGCCACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTGAGTCCAATG 113631
Query 148066 CCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGA 148123
||||| || ||| || || || |||| || | || ||| |||||| |||||||
Sbjct 113632 CCGCCAGCGGTCTTGGAGAT--CAACGCACACGTCTTCAGTGTGTCGTAGATACCGTCGA 113689
Query 148124 TGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCG 148183
||||||| | || | | | | | || || || |||| || || | |||||||||
Sbjct 113690 TGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCG 113749
Query 148184 CCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCT 148243
| ||| || || || || || || || | ||||| ||| | || ||||
Sbjct 113750 CGTTGAACAGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAGTCGTAGGTCT 113809
Query 148244 CAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCT 148303
|||| || | || ||||| ||||| || ||||| | ||||| ||||||||||||||||
Sbjct 113810 CAATGGCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCT 113869
Query 148304 GTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGT 148363
|||| || || ||||| | |||||| ||| || ||| || || || |||
Sbjct 113870 GTGGGCGCTCTGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGCGCTCTAGCGTCTTGA 113929
Query 148364 AACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408
| |||||| ||| ||| | || || | || || | |||||||
Sbjct 113930 AGCCAAAGAACTGGTAGTTGAAGTCGCGGTCATATACAATGGCCG 113974
>seq113
Length=382967
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| ||| | ||||| || | | ||||| || ||||||||||||||| | ||
Sbjct 361518 ACGCAGGCGGAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGT 361577
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| || ||||| || || | | |||| |||||||| || || ||||| || ||
Sbjct 361578 GCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACC 361637
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| ||||| || || ||| | | || | ||||||| | ||| ||||| |
Sbjct 361638 CTCCTTATCCTGGATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCTACTTCTAG 361697
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||| | || || ||||| || || || | ||| ||||||||
Sbjct 361698 CGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 361739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476608393951560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |