Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq465 149 6e-31 seq113 89.7 5e-13 >seq465 Length=132516 Score = 149 bits (164), Expect = 6e-31 Identities = 972/1545 (63%), Gaps = 55/1545 (4%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTC-TGAGATACACATTGCTAGTGAAAGG 146951 ||||| || || ||||| || ||||||||||| | |||| || | || ||| | || Sbjct 112456 TTGACGACCTGGAACTCACCAGCCAGCACACGACGTGAG-TAGATGTTCGAGGTGTATGG 112514 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 ||| || |||| || || || | || || | || | || ||||||||| ||| || Sbjct 112515 CTCGAAGCACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAAC 112574 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071 || | || || |||| ||| | | | ||| ||||||||||| | ||||||||| Sbjct 112575 CAGGAGAGAGTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACGAAGCCCAGTCCCA 112634 Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGC--ACTCCTCGACTGGCGGGA 147129 | || || |||||| ||| | |||||||| ||| || | | ||| | Sbjct 112635 AAGGTCAGAAGGAGTCACGCCCCAGAGATCGTACTGAAGCTGACCCTTGGAC-------A 112687 Query 147130 CTGCCAGCGAAC----GTAGTGTAGCTTCCGTCGC--GCTGC---GCCAATTCACAGCTT 147180 | | |||||| ||| |||||| | | | ||| | || | || ||| Sbjct 112688 CAG---GCGAACCCTCGTA-TGTAGCATATGGACCAAGCTCCTTGGCGATATCGCAGGAC 112743 Query 147181 GCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCT 147240 | | ||| || | | ||| || || ||| ||| || |||| || | ||||| Sbjct 112744 GACGTGAGAGCCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTTGGCTTCA 112803 Query 147241 -TCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGAC 147299 ||| ||| |||||| ||| || | || ||||| || | |||||| | ||| | Sbjct 112804 GTCGA-CTCAAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAACACCAAG 112862 Query 147300 GCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCG 147359 ||||| || | ||| |||||||| || | | | || ||||||||| Sbjct 112863 ACCGATGGGCCTATGGCGGAAATTGCTGCGGCGTGCCTCCTCCACAGGGTAGTGGTTGAC 112922 Query 147360 ATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAA 147419 || || ||||||||||||||||| || || | || | | ||| || | ||| Sbjct 112923 CTCGATGATCTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCTTGTGGAA 112982 Query 147420 ATCATAAGTCCC-------GTCTTCGACACGTACGCATTGGTTCACGGCGATAGACGCCA 147472 || || || | || |||||| | | || | | ||||| || |||| Sbjct 112983 GTCG-AACTCGCCACGCTTGTAGTCGACA---AAGGATGGA---AGGGCGAGGGAAGCCA 113035 Query 147473 GATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGC 147532 | ||||| ||||| ||| || | | || ||| || || || | ||| |||||| Sbjct 113036 GGTTGCACACGGCGACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGG 113095 Query 147533 TGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGA 147592 || ||| || | || | ||| ||| |||| ||||| ||||| ||| | | Sbjct 113096 AGCTGCGAATGGTACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACA 113155 Query 147593 GCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGC-AGGTCCTGC 147651 ||||| |||| ||| ||||| |||| || | || | || || | ||| Sbjct 113156 GCATGAACGGGTTGCCAGTCTCAGTCTGCGCCTCGAGAATGG-CGTACCAGAGCTTCTGG 113214 Query 147652 GCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAAC 147711 || || || || ||| | |||| ||||| || ||| | | ||| ||| Sbjct 113215 GCACGAACAGTCTCGCGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTCGAAC 113274 Query 147712 TCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATG 147771 || ||||||||| |||||||| || || |||| | || ||||| || | |||| | Sbjct 113275 TCATCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCG 113334 Query 147772 TCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCG 147831 ||| | | | || || ||| || ||||| || | ||| || ||||| | || || Sbjct 113335 CCGTTCTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCA 113394 Query 147832 CGCGCTT-TGCAA--TCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATG 147888 || ||| | | |||| || | |||||| | | ||| | || | | Sbjct 113395 CGAGCTCGTACCTCTTCCTTACCGTGGTTCTTGCGT---AGGTCAAGGAAGCCGAATACA 113451 Query 147889 TCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGG 147945 || |||||||| || || | ||||| ||| | ||||| ||||| || ||||| Sbjct 113452 TCCGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCTGA 113511 Query 147946 TCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTG 148005 ||||| | ||| | ||||||| | || || | ||| || || || | | || Sbjct 113512 TCGACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATGTT 113571 Query 148006 CCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATG 148065 ||||||||| | || | | |||| ||| || | |||||| || | |||||| Sbjct 113572 CCGTTGGTGCCACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTGAGTCCAATG 113631 Query 148066 CCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGA 148123 ||||| || ||| || || || |||| || | || ||| |||||| ||||||| Sbjct 113632 CCGCCAGCGGTCTTGGAGAT--CAACGCACACGTCTTCAGTGTGTCGTAGATACCGTCGA 113689 Query 148124 TGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCG 148183 ||||||| | || | | | | | || || || |||| || || | ||||||||| Sbjct 113690 TGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCG 113749 Query 148184 CCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCT 148243 | ||| || || || || || || || | ||||| ||| | || |||| Sbjct 113750 CGTTGAACAGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAGTCGTAGGTCT 113809 Query 148244 CAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCT 148303 |||| || | || ||||| ||||| || ||||| | ||||| |||||||||||||||| Sbjct 113810 CAATGGCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCT 113869 Query 148304 GTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGT 148363 |||| || || ||||| | |||||| ||| || ||| || || || ||| Sbjct 113870 GTGGGCGCTCTGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGCGCTCTAGCGTCTTGA 113929 Query 148364 AACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 | |||||| ||| ||| | || || | || || | ||||||| Sbjct 113930 AGCCAAAGAACTGGTAGTTGAAGTCGCGGTCATATACAATGGCCG 113974 >seq113 Length=382967 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||| | ||||| || | | ||||| || ||||||||||||||| | || Sbjct 361518 ACGCAGGCGGAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGT 361577 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 || ||| || ||||| || || | | |||| |||||||| || || ||||| || || Sbjct 361578 GCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACC 361637 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 || ||||| || || ||| | | || | ||||||| | ||| ||||| | Sbjct 361638 CTCCTTATCCTGGATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCTACTTCTAG 361697 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||| | || || ||||| || || || | ||| |||||||| Sbjct 361698 CGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 361739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476608393951560