Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq113 120 3e-22
seq53 82.4 7e-11
>seq113
Length=382967
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| || || | | || ||| | ||||| || |||||| || |||||||| || |
Sbjct 361739 TTCCTCCGCGCAGGCGCAGCACGAGATGTAGAGTGGACTCCTTCTGGATGTTGTAGTCCG 361798
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| || || |||| || |||||||| || ||||| ||||| ||||||||||||| ||
Sbjct 361799 ACAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAG 361858
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCC 35686
||| || |||||||||| |||||| ||| | |||| | | |||||| || ||
Sbjct 361859 GAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATTGTGTCGGATGACTCT 361917
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || | |||||| || || || || | || || || || ||||||||
Sbjct 361918 ACTTCAAGCGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 361967
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 35509 TCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGC 35568
||| ||||| | | | |||||| || | || |||||| ||||||||||| ||||
Sbjct 361512 TCCTCCACGCAGGCGGAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGA 361571
Query 35569 CAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGG 35628
| || || | || ||||||||||| || ||||| || | ||||||||||||| |||
Sbjct 361572 GAGAGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGG 361631
Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687
| | |||||| ||| |||| || | || |||| | | || ||| || || |
Sbjct 361632 GATACCCTCCTTATCCTGGATC-TTCGATTTGACGTTGTCAATGGTATCGGATGACTCTA 361690
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
| || | |||||| || || || || | || || || || ||||||||||
Sbjct 361691 CTTCTAGCGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCATTC 361741
Score = 84.2 bits (92), Expect = 2e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | ||| || |||| || ||||| || || || ||
Sbjct 362004 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCGTCCTCAAGCTGTTTGCCGGCGAA 362063
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
||||| ||||||||||||| |||| || |||||||||
Sbjct 362064 GATCAAGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 362102
>seq53
Length=59568
Score = 82.4 bits (90), Expect = 7e-11
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | ||| || | || || || ||||| || || ||
Sbjct 12442 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAA 12501
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652
|||| ||||||||||||| |||| || |||||||||| ||||||
Sbjct 12502 GATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 12549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450790945952680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |