Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq465 138 2e-27
>seq465
Length=132516
Score = 138 bits (152), Expect = 2e-27
Identities = 506/784 (65%), Gaps = 14/784 (2%)
Strand=Plus/Plus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
|| || || || || | ||| || ||| |||| || ||||||||||| || || |||
Sbjct 113104 ATGGTACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGCATGAAC 113163
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471
|| | ||||| ||| |||| | |||| ||| | | ||| | | ||| |
Sbjct 113164 GGGTTGCCAGTCTCAGTCTGCGCCTCGAGAATGGCGTACCAGAGCTTCTGGGCACGAA-- 113221
Query 69472 ACGGTCTTGTAACGCTT---CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCT 69528
| |||| | || ||| ||| || || | || || ||| ||||| |||||
Sbjct 113222 -CAGTCTCGCGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTCGAACTCATCG 113280
Query 69529 CCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCA 69588
|| | || || | | ||||| || || || || ||||| | || |||| | | |
Sbjct 113281 CCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCGTTC 113340
Query 69589 TCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTT 69648
|| | ||||| ||||| || |||||||||||||| || || ||||| || | | |
Sbjct 113341 TCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCACGAGCT 113400
Query 69649 CTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGC 69708
| ||||| || || || || || || || || | | | ||| | |||
Sbjct 113401 CGTACCTCTTCCTTACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATACATCCGCGTGC 113460
Query 69709 CATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTAT 69768
||||| || || || || || | | || || || || || || |||||||| | |||
Sbjct 113461 CATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCTGATCGACGTAG 113520
Query 69769 CTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTT 69828
| || ||||| || ||||| | |||||||| || | |||||| ||| | || || ||
Sbjct 113521 CGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATGTTCCGTTGGTG 113580
Query 69829 CCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCTG 69886
||| ||| || || | || || || | | || | || || || || || |
Sbjct 113581 CCACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTG--AGTCCAATGCCGCCAG 113638
Query 69887 CCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCA 69945
| | || ||||| | |||| |||| |||| |||||| || ||||| || ||||| ||
Sbjct 113639 CGGTCTTGGAGATCAACGCAC-ACGTCTTCAGTGTGTCGTAGATACCGTCGATGCTGTCC 113697
Query 69946 TCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAAT 70005
|| |||||| | || || ||| ||||| ||| | | |||||||| || ||
Sbjct 113698 TCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCGCGTTGAAC 113757
Query 70006 AATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAATAGC 70064
| ||||| || || || ||||| | |||| || | | || | ||| || ||||| ||
Sbjct 113758 AGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAG-TCGTAGGTCTCAATGGC 113816
Query 70065 TGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124
|| || || ||| || || | ||||||||||| | ||| ||||| || ||
Sbjct 113817 CTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGTGGGCG 113876
Query 70125 TTCT 70128
|||
Sbjct 113877 CTCT 113880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686904755824440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |