Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq465 138 2e-27 >seq465 Length=132516 Score = 138 bits (152), Expect = 2e-27 Identities = 506/784 (65%), Gaps = 14/784 (2%) Strand=Plus/Plus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 || || || || || | ||| || ||| |||| || ||||||||||| || || ||| Sbjct 113104 ATGGTACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGCATGAAC 113163 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471 || | ||||| ||| |||| | |||| ||| | | ||| | | ||| | Sbjct 113164 GGGTTGCCAGTCTCAGTCTGCGCCTCGAGAATGGCGTACCAGAGCTTCTGGGCACGAA-- 113221 Query 69472 ACGGTCTTGTAACGCTT---CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCT 69528 | |||| | || ||| ||| || || | || || ||| ||||| ||||| Sbjct 113222 -CAGTCTCGCGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTCGAACTCATCG 113280 Query 69529 CCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCA 69588 || | || || | | ||||| || || || || ||||| | || |||| | | | Sbjct 113281 CCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCGTTC 113340 Query 69589 TCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTT 69648 || | ||||| ||||| || |||||||||||||| || || ||||| || | | | Sbjct 113341 TCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCACGAGCT 113400 Query 69649 CTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGC 69708 | ||||| || || || || || || || || | | | ||| | ||| Sbjct 113401 CGTACCTCTTCCTTACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATACATCCGCGTGC 113460 Query 69709 CATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTAT 69768 ||||| || || || || || | | || || || || || || |||||||| | ||| Sbjct 113461 CATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCTGATCGACGTAG 113520 Query 69769 CTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTT 69828 | || ||||| || ||||| | |||||||| || | |||||| ||| | || || || Sbjct 113521 CGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATGTTCCGTTGGTG 113580 Query 69829 CCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCTATTCCTCCTG 69886 ||| ||| || || | || || || | | || | || || || || || | Sbjct 113581 CCACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTG--AGTCCAATGCCGCCAG 113638 Query 69887 CCATTTTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCA 69945 | | || ||||| | |||| |||| |||| |||||| || ||||| || ||||| || Sbjct 113639 CGGTCTTGGAGATCAACGCAC-ACGTCTTCAGTGTGTCGTAGATACCGTCGATGCTGTCC 113697 Query 69946 TCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAAT 70005 || |||||| | || || ||| ||||| ||| | | |||||||| || || Sbjct 113698 TCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCGCGTTGAAC 113757 Query 70006 AATGTAGGAGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAATAGC 70064 | ||||| || || || ||||| | |||| || | | || | ||| || ||||| || Sbjct 113758 AGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAG-TCGTAGGTCTCAATGGC 113816 Query 70065 TGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCG 70124 || || || ||| || || | ||||||||||| | ||| ||||| || || Sbjct 113817 CTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGTGGGCG 113876 Query 70125 TTCT 70128 ||| Sbjct 113877 CTCT 113880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686904755824440