Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq465 116 3e-21 seq113 89.7 4e-13 >seq465 Length=132516 Score = 116 bits (128), Expect = 3e-21 Identities = 287/432 (66%), Gaps = 5/432 (1%) Strand=Plus/Plus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 || || ||| |||| ||||| || | |||| ||||||||| || ||||||||||| || Sbjct 113302 GGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCGTTCTCTTGCACTCGCTTCATGAAG 113361 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 | ||| || | ||| | ||||| || || || | |||| | |||||| |||| | Sbjct 113362 AGATCGGGAATCCAGAGGGCGTAGAAGAGGTCACGAGCTCGTACCTCTTCCTTACCG-TG 113420 Query 131723 AtttttttCAAATTTAAA-AAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGC 131781 || || | | || ||| | || | ||||| ||||| || || | || | || Sbjct 113421 GTTCTTGCGTAGGTCAAGGAAGCCGAATACATCCGCGTGCCATGGCTCGAGGTAGATGGC 113480 Query 131782 CATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATAC 131838 | || || |||||| || || |||| || | ||| | |||||||||| || Sbjct 113481 GAAAGCACCAGGGCGCTTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGTAGAC 113540 Query 131839 GCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATT 131898 || | ||| || | ||| |||| |||| ||||||| ||||||| ||| | Sbjct 113541 ACGGAGCATCGGGATGAGACCATTGGATGTTCCGTTGGTGCCACCAATGTAGGAGCCGGT 113600 Query 131899 GGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCA 131958 ||| | ||| ||| || ||||||||||| || || || || ||||| | || || Sbjct 113601 GGCACGGATGCGGTGCACATTGAGTCCAATGCCGCCAGCGGTCTTGGAGATCAACGCACA 113660 Query 131959 TTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCA 132018 | | || |||| |||||||| || | ||||||| | ||||||| | ||||| Sbjct 113661 CGTCTTCAGTGTGTCGTAGATACCGTCGATGCTGTCCTCCTTCATGTCGATGAGGAAGCA 113720 Query 132019 AGAGGACAACTG 132030 || |||| ||| Sbjct 113721 GGATGACATCTG 113732 >seq113 Length=382967 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| |||| || | ||||| || | || || || || ||||| ||||||||| Sbjct 361513 CCTCCACGCAGGCGGAGCACCAAGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 361572 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | || || ||||| || || || | ||||||||||| || ||||| || Sbjct 361573 AGAGTGCGGCCATCCTCCAGCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 361632 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| ||||| |||||| ||| | | | || | || || | | || ||| Sbjct 361633 ATACCCTCCTTATCCTGGATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCTACT 361692 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || || | || || || || || || || ||||| ||||| Sbjct 361693 TCTAGCGTGATGGTCTTTCCAGTGAGCGTCTTGACGAAGATCTGCAT 361739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931960743752