Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq465 98.7 3e-15 seq6 89.7 2e-12 >seq465 Length=132516 Score = 98.7 bits (108), Expect = 3e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| ||||||| | ||||||| ||||||||||||||||| || ||| ||| Sbjct 113555 ATCCCGATGCTCCGTGTCTACAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAG 113496 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 ||||| || || ||| |||||||||| ||||| |||||||| || Sbjct 113495 CGCCCTGGTGCTTTCGCCATCTACCTCGAGCCATGGCACGCGGA 113452 >seq6 Length=114070 Score = 89.7 bits (98), Expect = 2e-12 Identities = 117/161 (73%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768 || || ||||| ||||||| || || || | || || |||||| |||| || ||||| Sbjct 15232 CGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCT-CTTTCGCGTCCAT 15290 Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828 ||||||| | || ||||| || || |||| ||||| ||||| ||||| || ||| Sbjct 15291 CTTCTGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCCAACGAGCTCATCTC 15350 Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || |||||||| |||| |||||| || || || |||| Sbjct 15351 CCGTGACGAGGGCATGCACACCGACTTTGCATGCCTGCTCT 15391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588326414888595