Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq465 98.7 3e-15
seq6 89.7 2e-12
>seq465
Length=132516
Score = 98.7 bits (108), Expect = 3e-15
Identities = 84/104 (81%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037
|| || ||| ||||||| | ||||||| ||||||||||||||||| || ||| |||
Sbjct 113555 ATCCCGATGCTCCGTGTCTACAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAG 113496
Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
||||| || || ||| |||||||||| ||||| |||||||| ||
Sbjct 113495 CGCCCTGGTGCTTTCGCCATCTACCTCGAGCCATGGCACGCGGA 113452
>seq6
Length=114070
Score = 89.7 bits (98), Expect = 2e-12
Identities = 117/161 (73%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 443709 CGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCAT 443768
|| || ||||| ||||||| || || || | || || |||||| |||| || |||||
Sbjct 15232 CGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCT-CTTTCGCGTCCAT 15290
Query 443769 CTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAG 443828
||||||| | || ||||| || || |||| ||||| ||||| ||||| || |||
Sbjct 15291 CTTCTGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCCAACGAGCTCATCTC 15350
Query 443829 TCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
|| |||||||| |||| |||||| || || || ||||
Sbjct 15351 CCGTGACGAGGGCATGCACACCGACTTTGCATGCCTGCTCT 15391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588326414888595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |