Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq465 262 5e-65
seq6 132 6e-26
>seq465
Length=132516
Score = 262 bits (290), Expect = 5e-65
Identities = 1118/1743 (64%), Gaps = 55/1743 (3%)
Strand=Plus/Plus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|| ||||||||||| || ||||| | || |||||||| | | |||||| || |
Sbjct 112150 CGAAGGTAGTACATGCCGGTCTTCAAACCGAGCTTCCAGCCGGCGAAATGCATGGAAGTG 112209
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956
| ||| | ||| || | |||| || ||||| || |||||||||||||||
Sbjct 112210 ATCTTACCCATGGTGGGCTCCTTCATGTGGATGTTCAATGACTGAGATTGATCGATGAAG 112269
Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTG 118016
|| || || || ||||| | || | | | ||||||||| || ||| ||
Sbjct 112270 GCACCGCGGTCAGCAGCCATCTGGATGATGGTACGCTGCGAGATTTCCCATACGGTCTTG 112329
Query 118017 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTG 118076
|| ||| |||| | || |||||||| | ||| | |||||||| ||||| | ||
Sbjct 112330 TAAAGGGTCTTGGTCTCTTCTGGGATGTTGGGGATCCTCTGGATGGAACCACCATC--TG 112387
Query 118077 ACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 118133
| |||| | | |||||| | || ||||||||||| || | ||| |||| | |
Sbjct 112388 -CAATGATACGGTTCTTCATGTTCTCAGACCAGAGACCCATGTCGACGAGGTCCTTGAGG 112446
Query 118134 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTC-TCAGATAGATATTGGT 118192
|| ||||| || |||||||| || || || | | || ||||| || |
Sbjct 112447 AGCCAAGGGTTGACGACCTGGAACTCACCAGCCAGCACACGACGTGAG-TAGATGTTCGA 112505
Query 118193 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 118252
||||||||||| |||||||| ||||| || | || || | || ||||| || |||||
Sbjct 112506 GGTGTATGGCTCGAAGCACTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCAT 112565
Query 118253 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTC 118312
||| || | || || ||| || | ||| | | || ||||| | | |
Sbjct 112566 GGGCGCAACCAGGAGAGAGTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACGAAGC 112625
Query 118313 CCAGT--CGTAGTTGAG-CTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 118369
||||| | || | || ||| | || ||| | ||| |||| || ||| |
Sbjct 112626 CCAGTCCCAAAGGTCAGAAGGAGTCACGCC---CCAGAGATCGTACTGAAGCTGACCCTT 112682
Query 118370 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC---GCCAATTCGGA 118426
|||| | ||||| ||||| |||| ||||||| | ||| |||| || | ||| |
Sbjct 112683 GGACACAGGCGAACCCTCGTATGTAGCATATGGAC---CAAGCTCCTTGGCGATATCGCA 112739
Query 118427 GCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGC 118486
| || | ||| || ||||| || ||||| || || || | | || | ||||||
Sbjct 112740 GGACGACGTGAGAGCCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTTGGC 112799
Query 118487 CTC-GTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACAC 118545
|| ||| || ||||| | || || | || |||| || ||||| || ||||
Sbjct 112800 TTCAGTC-GACTCAAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAACAC 112858
Query 118546 CGAGGCCAATTGGGCGATGTCTCATATTAGACTTC--CGAGCGGTCTCCACGGGATAAAA 118603
| || || || || | ||| | | ||| || | || || |||||| || ||
Sbjct 112859 CAAGACCGATGGGCCTATGGCGGAAATT--GCTGCGGCGTGCCTCCTCCACAGGGTAGTG 112916
Query 118604 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 118663
|| ||||| | | | || || || ||||| ||| | || | || || |||||
Sbjct 112917 GTTGACCTCGATGATCTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCTT 112976
Query 118664 TTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAG 118723
| | | || || || | || | | |||| | |||||||||| || |||||
Sbjct 112977 GTGGAAGTCGAACTCGCCACGCTTGTAGTCGACAAAGGATGGAAGGGCGAGGGAAGCCAG 113036
Query 118724 ATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGA 118783
|| ||||| | | |||||| | ||||| |||| | ||| || ||||| | ||| ||
Sbjct 113037 GTTGCACACGGCGACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGGA 113096
Query 118784 ACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAG 118843
|| |||||| || | |||||| || || ||||| |||| || || |||||||| ||
Sbjct 113097 GCTGCGAATGGTACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAG 113156
Query 118844 CATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAG 118902
|||| | || | || ||||| || || | || |||||| || | ||||| | || | |
Sbjct 113157 CATGAACGGGTTGCCAGTCTCAGTCTGCGCCTCGAGAATGGCGTACCAGAGCTTCTG-GG 113215
Query 118903 CTGGCACAGTGGCGTTGGCTCG-CCCCTCTTC-----CTCGTACTTTGTGTAGAGGGCTT 118956
| | ||||| || || ||| | ||| |||||| |||||||| | |
Sbjct 113216 CACGAACAGTCTCG------CGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCT 113269
Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016
| ||||| || || | | || | || || || || | ||||| | ||| | ||
Sbjct 113270 CGAACTCATCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCC 113329
Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076
| | || ||| | || |||||||||||||| || || |||||||| || ||||||
Sbjct 113330 ACTCGCCGTTCTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGA 113389
Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136
| || ||| || | ||||| | || || || || | || | ||| | | |
Sbjct 113390 GGTCACGAGCTCGTACCTCTTCCTTACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATA 113449
Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAG 119190
|||||||||||| || || ||||| | |||| | || | | || |||
Sbjct 113450 CATCCGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACC---AGGGCGCTTGTTGCCAC 113506
Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250
|||| | || || | || ||| ||| | ||||| ||||| || |||| ||||| ||
Sbjct 113507 CCTGATCGACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGG 113566
Query 119251 ATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCAT 119308
|| || || || || | || || ||| | |||| | || ||| | | |
Sbjct 113567 ATGTTCCGTTGGTGCCACCAATGTAGGAGCC--GGTGGCACGGATGCGGTGCACATTGAG 113624
Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368
||||| || || || ||| ||||| ||| ||| | | || || ||||||| ||
Sbjct 113625 TCCAATGCCGCCAGCGGTCTTGGAGATCAACGCACACGTCTTCAGTGTGTCGTAGATACC 113684
Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428
||||| ||| |||| | |||||||||||||| ||||| ||||| |||| ||
Sbjct 113685 GTCGATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGT 113744
Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTGTCGT 119487
|| |||||||| || || || | || || |||| ||| ||| ||||| | |||||
Sbjct 113745 TCCCGCGTTGAACAGCGTAGGCGAGGCATGTGTGAA-GTACTTTTGCGACATGTAGTCGT 113803
Query 119488 AGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547
||||||| | | | ||||||||| || || || || | | ||| ||||| | ||
Sbjct 113804 AGGTCTCAATGGCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACACGCATGAGCA 113863
Query 119548 TGT 119550
|||
Sbjct 113864 TGT 113866
>seq6
Length=114070
Score = 132 bits (146), Expect = 6e-26
Identities = 310/457 (68%), Gaps = 22/457 (5%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTT-CCCGTCCAAGCT-GATATTCTCCA 129785
|| || || || ||||||||||||||||| ||||| |||| | ||| ||| |||||||
Sbjct 15668 TAATCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCG--CGAGCGAGATGTTCTCCA 15611
Query 129786 TAAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAG 129843
| || || || ||||| | | ||| | | ||| || | ||| || ||
Sbjct 15610 TGAAGTCGAAGGGGTTGGTGGCGTTGTAGACCTTGGTGTTGC--CAAGGGCCAACAGCAG 15553
Query 129844 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTT 129903
|| || | |||| |||| ||||||| |||| ||| ||||| |||| ||
Sbjct 15552 GCGGTCAGCGACGAACTCGATGTACTGGCACATGAGGGTGGAATTCATGCCGAGCAGAGC 15493
Query 129904 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGC 129963
|| ||||| || || || |||| ||| |||||| || ||||| || | ||||||
Sbjct 15492 GCAGGGGAGAGCTTCGGTGAGGAACTCCTGCTCAATCTCAACAGCCTCGGTGATGATGGC 15433
Query 129964 GTGAATGGTCTCCGTGCCAGGTC---TATTGCGCAAAGTCTTGAAGAGTTCCACG---GC 130017
| | || ||| ||| || | | ||| | | || |||||| || | ||
Sbjct 15432 CTTGACGGCATCCTTGCTGGGGCGGGTGTTGAGAAGAGA---GAAGAG---CAGGCATGC 15379
Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077
||| || ||| | |||||||||||||||||||| || || |||||| ||||||||
Sbjct 15378 AAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTAAGACCTGG 15319
Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGATCC 130136
||| ||||| |||||||| | |||||| || | | | ||| ||||| ||||||||| |
Sbjct 15318 CATCAGACCGCGCTTCTTGAGCCAGAAGATGGACGCGAAA-GAGCCGCTGAAGAAGATAC 15260
Query 130137 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173
|||| || || || || | |||||| | |||||
Sbjct 15259 CCTCAACGGCAGCAAAGGCGACGAGACGGTTGGCAAA 15223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618431558962760
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