Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq465 257 2e-63 seq6 132 6e-26 >seq465 Length=132516 Score = 257 bits (284), Expect = 2e-63 Identities = 1116/1744 (64%), Gaps = 41/1744 (2%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||||||| ||||| ||||||| || ||| | || || ||||| ||||||||||| | Sbjct 113874 CCCACAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGCGAAGACATTGAGAAGGC 113815 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 104339 | | ||||| |||||| | ||||| ||| ||| |||| || || | || || || | Sbjct 113814 CATTGAGACCTACGACTACATGTCGCAAAAGTAC-TTCACACATGCCTCGCCTACGCTGT 113756 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || || || || | || || ||||| |||||||| |||| || ||||||| Sbjct 113755 TCAACGCGGGAACGCCCAACCCTCAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGG 113696 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || ||| |||||||||| | || || | | ||||||| ||||| ||| |||| Sbjct 113695 ACAGCATCGACGGTATCTACGACACACTGAAGACGTGTGCGTTGATCTCCAAGACCGCTG 113636 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | || ||||| | | | || | | |||| || ||| | || || | Sbjct 113635 GCGGCATTGGACTCAATGTGCACCGCATCCGTGCCACCGGCTCCTACATTGGTGGCACCA 113576 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | || ||| ||||| | || || ||||| || || | ||| ||| || ||||| | Sbjct 113575 ACGGAACATCCAATGGTCTCATCCCGATGCTCCGTGTCTACAACAACACCGCTCGCTACG 113516 Query 104580 TAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 | |||| | ||| | | | | || || |||| |||| || |||||||||||| Sbjct 113515 TCGATCAGGGTGG-CAACAAGCGCCCTGGTGCTTTCGCCATCTACCTCGAGCCATGGCAC 113457 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 |||||| | | | |||||||| | || ||||| ||| | || |||| || Sbjct 113456 GCGGATGTATTCGGCTTCCTTGACCTACGCAAGAACCACGGTAAGGAAGAGGTACGAGCT 113397 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || || ||||||| ||| ||||||||||| ||||||||||||||| |||| | |||| Sbjct 113396 CGTGACCTCTTCTACGCCCTCTGGATTCCCGATCTCTTCATGAAGCGAGTGCAAGAGAAC 113337 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815 ||| | ||| | ||| | || || || || |||||||| |||| | | || || Sbjct 113336 GGCGAGTGGACACTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACGGCGAT 113277 Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAG-----GAAGAA-GGTCGGGCGACTGCGACG 104869 ||||| || | || ||||| |||||| ||| || ||||| | ||||| || Sbjct 113276 GAGTTCGAGGAGCTCTACACCCGTTACGAGCGCGAGAACAAGGGTCGCGAGACTG-TTCG 113218 Query 104870 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929 |||| || | ||| | || |||||| || | || || |||||||| | || Sbjct 113217 TGCCCAGAAGC-----TCTGGTACGCCATTCTCGAGGCGCAGACTGAGACTGGCAACCCG 113163 Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989 | |||||| ||||| ||||| || ||| ||| || || ||||| | ||| || Sbjct 113162 TTCATGCTGTACAAGGACGCTTGCAACAGGAAGTCCAACCAGAAGAACCTCGGTACCATT 113103 Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049 || ||||| ||||| || || || | || || || | |||||| || ||| Sbjct 113102 CGCAGCTCCAACCTCTGCACTGAGATTGTCGAGTTCACTGCTCCTGATGAGGTCGCCGTG 113043 Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGA 105108 || ||||| || || |||| || || | ||| || | | | | | | || || Sbjct 113042 TGCAACCTGGCTTCCCTCGCCCTTCCATCCTTTGTCGA-CTACAAGCGTGGCGAGTTCGA 112984 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 | | || |||||||| || || | ||||| ||||| |||| | || || Sbjct 112983 CTTCCACAAGCTCCACGAGGTGACCATGGTCGTCACACGTAACCTCAACAAGATCATCGA 112924 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 || ||||| || ||| || || ||| | | || | || || || Sbjct 112923 GGTCAACCACTACCCTGTGGAGGAGGCACGCCGCAGCAATTTCCGCCATAGGCCCATCGG 112864 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTC 105285 ||| |||||||||||||| || |||| ||| | ||| ||| | | ||||| | Sbjct 112863 TCTTGGTGTTCAGGGTCTTGCTGATGCTTTCCTCGCCCTTCGTCTGC---CTTTTGAGT- 112808 Query 105286 CGAC-GAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 |||| ||||| ||| | |||| | | || || ||||| || || ||||| ||||| Sbjct 112807 CGACTGAAGCCAAGAAGCTCAACACCCAGATCTTCGAGACAATTTACCACGCGGCTCTCA 112748 Query 105345 AGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404 | || | || | || ||| ||||||||||| || | |||||||| || | Sbjct 112747 CGTCGTCCTGCGATATCGCCAAGGAGCTTGGTCCATATGCTACATACGAGGGTTCGCCTG 112688 Query 105405 CTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTTCACTA 105459 || |||||| |||||| | ||| | |||| |||| || | ||| | Sbjct 112687 TGTC-CAAGGGTCAGCTTCAGTACGATCTCTGGG-GCGTGACTCCTTCTGACCTT---TG 112633 Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 ||||||| | | ||||| ||| || | ||| | || ||| |||||| | Sbjct 112632 GGACTGGGCTTCGTTGAAGGACAAGATCGCTCAGCATGGTGTGCGCAACTCTCTCCTGGT 112573 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 || || ||||| || ||||| || | || || | || || || || ||||| || || Sbjct 112572 TGCGCCCATGCCTACTGCCTCGACTTCGCAGATTCTTGGAAACAACGAGTGCTTCGAGCC 112513 Query 105580 CTACACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638 ||||| |||||||||| || | | | || || || ||||| | | |||||| Sbjct 112512 ATACACCTCGAACATCTA-CTCACGTCGTGTGCTGGCTGGTGAGTTCCAGGTCGTCAACC 112454 Query 105639 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 105698 ||| | | |||||| || || ||||||||||| || | |||||| | | | Sbjct 112453 CTTGGCTCCTCAAGGACCTCGTCGACATGGGTCTCTGGTCTGAGAACATGAAGAACCGTA 112394 Query 105699 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGT 105758 | | || ||||||||||| || | || | || ||| | || | |||| Sbjct 112393 TCATTGCAGATGGTGGTTCCATCCAGAGGATCCCCAACATCCCAGAAGAGACCAAGACCC 112334 Query 105759 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818 | ||| || || ||||||||| | | |||| | ||||| || || || | Sbjct 112333 TTTACAAGACCGTATGGGAAATCTCGCAGCGTACCATCATCCAGATGGCTGCTGACCGCG 112274 Query 105819 GTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCA 105878 || |||||| |||||| ||| |||| || |||| | || || ||| | Sbjct 112273 GTGCCTTCATCGATCAATCTCAGTCATTGAACATCCACATGAAGGAGCCCACCATGGGTA 112214 Query 105879 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 105938 || || |||| ||||| | | | |||||| ||| | || || || ||||| |||| Sbjct 112213 AGATCACTTCCATGCATTTCGCCGGCTGGAAGCTCGGTTTGAAGACCGGCATGTACTACC 112154 Query 105939 TCCG 105942 | || Sbjct 112153 TTCG 112150 >seq6 Length=114070 Score = 132 bits (146), Expect = 6e-26 Identities = 167/224 (75%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 94792 |||||| || || | ||||| || || |||||| | |||||| | | | |||| | | Sbjct 15159 AGTTCCATGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCTCAGACAAGAACTC 15218 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 | ||||| | || ||| |||| ||||| |||||||||||||||||| || | Sbjct 15219 CA-CTTTTGCCAACCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCT 15277 Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911 | ||| ||| | || | |||||||||||||| ||||| ||||||||||| ||||||| Sbjct 15278 CTTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCC 15336 Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||| ||||| ||||||||||| | ||| || ||||| Sbjct 15337 AACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGC 15380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257366052040