Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq465 257 2e-63
seq6 132 6e-26
>seq465
Length=132516
Score = 257 bits (284), Expect = 2e-63
Identities = 1116/1744 (64%), Gaps = 41/1744 (2%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
||||||| ||||| ||||||| || ||| | || || ||||| ||||||||||| |
Sbjct 113874 CCCACAGCACATGCTCATGCGTGTCGCCGTTGGCATCCATGGCGAAGACATTGAGAAGGC 113815
Query 104281 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 104339
| | ||||| |||||| | ||||| ||| ||| |||| || || | || || || |
Sbjct 113814 CATTGAGACCTACGACTACATGTCGCAAAAGTAC-TTCACACATGCCTCGCCTACGCTGT 113756
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| || || || || | || || ||||| |||||||| |||| || |||||||
Sbjct 113755 TCAACGCGGGAACGCCCAACCCTCAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGG 113696
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| ||| |||||||||| | || || | | ||||||| ||||| ||| ||||
Sbjct 113695 ACAGCATCGACGGTATCTACGACACACTGAAGACGTGTGCGTTGATCTCCAAGACCGCTG 113636
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| || ||||| | | | || | | |||| || ||| | || || |
Sbjct 113635 GCGGCATTGGACTCAATGTGCACCGCATCCGTGCCACCGGCTCCTACATTGGTGGCACCA 113576
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| || ||| ||||| | || || ||||| || || | ||| ||| || ||||| |
Sbjct 113575 ACGGAACATCCAATGGTCTCATCCCGATGCTCCGTGTCTACAACAACACCGCTCGCTACG 113516
Query 104580 TAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635
| |||| | ||| | | | | || || |||| |||| || ||||||||||||
Sbjct 113515 TCGATCAGGGTGG-CAACAAGCGCCCTGGTGCTTTCGCCATCTACCTCGAGCCATGGCAC 113457
Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695
|||||| | | | |||||||| | || ||||| ||| | || |||| ||
Sbjct 113456 GCGGATGTATTCGGCTTCCTTGACCTACGCAAGAACCACGGTAAGGAAGAGGTACGAGCT 113397
Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755
|| || ||||||| ||| ||||||||||| ||||||||||||||| |||| | ||||
Sbjct 113396 CGTGACCTCTTCTACGCCCTCTGGATTCCCGATCTCTTCATGAAGCGAGTGCAAGAGAAC 113337
Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815
||| | ||| | ||| | || || || || |||||||| |||| | | || ||
Sbjct 113336 GGCGAGTGGACACTCATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACGGCGAT 113277
Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAG-----GAAGAA-GGTCGGGCGACTGCGACG 104869
||||| || | || ||||| |||||| ||| || ||||| | ||||| ||
Sbjct 113276 GAGTTCGAGGAGCTCTACACCCGTTACGAGCGCGAGAACAAGGGTCGCGAGACTG-TTCG 113218
Query 104870 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
|||| || | ||| | || |||||| || | || || |||||||| | ||
Sbjct 113217 TGCCCAGAAGC-----TCTGGTACGCCATTCTCGAGGCGCAGACTGAGACTGGCAACCCG 113163
Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989
| |||||| ||||| ||||| || ||| ||| || || ||||| | ||| ||
Sbjct 113162 TTCATGCTGTACAAGGACGCTTGCAACAGGAAGTCCAACCAGAAGAACCTCGGTACCATT 113103
Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049
|| ||||| ||||| || || || | || || || | |||||| || |||
Sbjct 113102 CGCAGCTCCAACCTCTGCACTGAGATTGTCGAGTTCACTGCTCCTGATGAGGTCGCCGTG 113043
Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGA 105108
|| ||||| || || |||| || || | ||| || | | | | | | || ||
Sbjct 113042 TGCAACCTGGCTTCCCTCGCCCTTCCATCCTTTGTCGA-CTACAAGCGTGGCGAGTTCGA 112984
Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168
| | || |||||||| || || | ||||| ||||| |||| | || ||
Sbjct 112983 CTTCCACAAGCTCCACGAGGTGACCATGGTCGTCACACGTAACCTCAACAAGATCATCGA 112924
Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228
|| ||||| || ||| || || ||| | | || | || || ||
Sbjct 112923 GGTCAACCACTACCCTGTGGAGGAGGCACGCCGCAGCAATTTCCGCCATAGGCCCATCGG 112864
Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTC 105285
||| |||||||||||||| || |||| ||| | ||| ||| | | ||||| |
Sbjct 112863 TCTTGGTGTTCAGGGTCTTGCTGATGCTTTCCTCGCCCTTCGTCTGC---CTTTTGAGT- 112808
Query 105286 CGAC-GAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344
|||| ||||| ||| | |||| | | || || ||||| || || ||||| |||||
Sbjct 112807 CGACTGAAGCCAAGAAGCTCAACACCCAGATCTTCGAGACAATTTACCACGCGGCTCTCA 112748
Query 105345 AGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAG 105404
| || | || | || ||| ||||||||||| || | |||||||| || |
Sbjct 112747 CGTCGTCCTGCGATATCGCCAAGGAGCTTGGTCCATATGCTACATACGAGGGTTCGCCTG 112688
Query 105405 CTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTTCACTA 105459
|| |||||| |||||| | ||| | |||| |||| || | ||| |
Sbjct 112687 TGTC-CAAGGGTCAGCTTCAGTACGATCTCTGGG-GCGTGACTCCTTCTGACCTT---TG 112633
Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519
||||||| | | ||||| ||| || | ||| | || ||| |||||| |
Sbjct 112632 GGACTGGGCTTCGTTGAAGGACAAGATCGCTCAGCATGGTGTGCGCAACTCTCTCCTGGT 112573
Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579
|| || ||||| || ||||| || | || || | || || || || ||||| || ||
Sbjct 112572 TGCGCCCATGCCTACTGCCTCGACTTCGCAGATTCTTGGAAACAACGAGTGCTTCGAGCC 112513
Query 105580 CTACACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACA 105638
||||| |||||||||| || | | | || || || ||||| | | ||||||
Sbjct 112512 ATACACCTCGAACATCTA-CTCACGTCGTGTGCTGGCTGGTGAGTTCCAGGTCGTCAACC 112454
Query 105639 AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 105698
||| | | |||||| || || ||||||||||| || | |||||| | | |
Sbjct 112453 CTTGGCTCCTCAAGGACCTCGTCGACATGGGTCTCTGGTCTGAGAACATGAAGAACCGTA 112394
Query 105699 TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGT 105758
| | || ||||||||||| || | || | || ||| | || | ||||
Sbjct 112393 TCATTGCAGATGGTGGTTCCATCCAGAGGATCCCCAACATCCCAGAAGAGACCAAGACCC 112334
Query 105759 TGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTG 105818
| ||| || || ||||||||| | | |||| | ||||| || || || |
Sbjct 112333 TTTACAAGACCGTATGGGAAATCTCGCAGCGTACCATCATCCAGATGGCTGCTGACCGCG 112274
Query 105819 GTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAGTCCAACGATGTCCA 105878
|| |||||| |||||| ||| |||| || |||| | || || ||| |
Sbjct 112273 GTGCCTTCATCGATCAATCTCAGTCATTGAACATCCACATGAAGGAGCCCACCATGGGTA 112214
Query 105879 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 105938
|| || |||| ||||| | | | |||||| ||| | || || || ||||| ||||
Sbjct 112213 AGATCACTTCCATGCATTTCGCCGGCTGGAAGCTCGGTTTGAAGACCGGCATGTACTACC 112154
Query 105939 TCCG 105942
| ||
Sbjct 112153 TTCG 112150
>seq6
Length=114070
Score = 132 bits (146), Expect = 6e-26
Identities = 167/224 (75%), Gaps = 4/224 (2%)
Strand=Plus/Plus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 94792
|||||| || || | ||||| || || |||||| | |||||| | | | |||| | |
Sbjct 15159 AGTTCCATGCATCCGCAAGAAGGCCGACTGGGCTCTCAAGTGGATCTCAGACAAGAACTC 15218
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
| ||||| | || ||| |||| ||||| |||||||||||||||||| || |
Sbjct 15219 CA-CTTTTGCCAACCGTCTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCT 15277
Query 94853 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 94911
| ||| ||| | || | |||||||||||||| ||||| ||||||||||| |||||||
Sbjct 15278 CTTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCC 15336
Query 94912 AACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||||| ||||| ||||||||||| | ||| || |||||
Sbjct 15337 AACGAGCTCATCTCCCGTGACGAGGGCATGCACACCGACTTTGC 15380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257366052040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |