Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq113 143 8e-29 seq322 87.8 5e-12 >seq113 Length=382967 Score = 143 bits (158), Expect = 8e-29 Identities = 158/209 (76%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || ||||| ||||| || ||||| || || || || | || || ||||| || | Sbjct 361533 CAAG-TGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCCA 361591 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || |||||||||||||| ||||| ||||| || ||||| || || || |||||||| | Sbjct 361592 GCTGCTTTCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGGA 361651 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || | ||| || || ||||| | ||| |||| || ||||| || || | ||||||| Sbjct 361652 TCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCTACTTCTAGCGTGATGGTCTTTC 361711 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || || || || || || ||||||||| Sbjct 361712 CAGTGAGCGTCTTGACGAAGATCTGCATT 361740 >seq322 Length=270006 Score = 87.8 bits (96), Expect = 5e-12 Identities = 102/137 (74%), Gaps = 3/137 (2%) Strand=Plus/Plus Query 377446 ATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAG 377505 ||||| | || ||||| |||||| | || || ||| || || | ||||||||||| Sbjct 73817 ATTTCCTTAAGACGTGGTACACCAAGAGTGACGTTC---TTGGACGACACACCAGCAAAA 73873 Query 377506 TGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACG 377565 ||||| || || || || | |||||||| ||||||||||| ||||| || || | || Sbjct 73874 TGGAAGGTGTTTAGCGTCATTTGAGTAGCAGGCTCACCAATGGACTGAGCAGCGAGGACA 73933 Query 377566 CCAACCATTTCTCCAGG 377582 |||||||| || || || Sbjct 73934 CCAACCATCTCGCCCGG 73950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515245255913213