Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq465 259 5e-64
>seq465
Length=132516
Score = 259 bits (286), Expect = 5e-64
Identities = 415/591 (70%), Gaps = 4/591 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| |||||| | || ||||| || || ||| | | | |||||| ||||
Sbjct 113860 TCATGCGTGTCGCCGTTGGCATCCATGGCGAAGACATTGAGAAGGCCATTGAGACCTACG 113801
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
||| ||| ||||||||||| || || ||| |||| || ||||||||||| || |||
Sbjct 113800 ACTACATGTCGCAAAAGTACTTCACACATGCCTCGCCTACGCTGTTCAACGCGGGAACGC 113741
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
||||||||||||| ||||||||| | | |||||||| ||| |||||||| |
Sbjct 113740 CCAACCCTCAGATGTCATCCTGCTTCCTCATCGACATGAAGGAGGACAGCATCGACGGTA 113681
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| || || ||| |||||| ||||||||| | || || || || ||
Sbjct 113680 TCTACGACACACTGAAGACGTGTGCGTTGATCTCCAAGACCGCTGGCGGCATTGGACTCA 113621
Query 53433 AC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491
| ||| | | ||||||| | |||| | || || || ||||| || ||
Sbjct 113620 ATGTGCACCG-CATCCGTGCCACCGGCTCCTACATTGGTGGCACCAACGGAACATCCAAT 113562
Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| || | || |||||||| |||| ||||||||| || || |||||| | ||||||||
Sbjct 113561 GGTCTCATCCCGATGCTCCGTGTCTACAACAACACCGCTCGCTACGTCGATCAGGGTGGC 113502
Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611
|||||| || | |||||||||||||||||||| |||||||| || | | |
Sbjct 113501 AACAAGCGCCCTGGTGCTTTCGCCATCTACCTCGAGCCATGGCACGCGGATGTATTCGGC 113442
Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TAC 53670
|| || || || || ||| || ||| | |||||| | || |||||||| || |||
Sbjct 113441 TTCCTTGACCTACGCAAGAACCACGGTAAGGAAGAGGTACGAGCTCGTGACCTCTTCTAC 113382
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730
|| || |||||||| || ||||||||| | ||| | || ||| |||||| ||
Sbjct 113381 -GCCCTCTGGATTCCCGATCTCTTCATGAAGCGAGTGCAAGAGAACGGCGAGTGGACACT 113323
Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781
|||||||| ||||||||||| || || | |||||||| || |||||
Sbjct 113322 CATGTGCCCCAACGAGTGCCCTGGTCTTGCCGACGTCTACGGCGATGAGTT 113272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212778265800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |