Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq113 91.5 1e-13 >seq113 Length=382967 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||| || || || ||||| || ||||| || || | Sbjct 361967 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGCTTGAAGTAGAGTCATCC 361908 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | || || || ||||| || || | || || || || Sbjct 361907 GACACAATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 361848 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| || || ||||||||||| || || || |||| ||||| | || |||||| Sbjct 361847 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCCGCACGCTGTCGGACTACAAC 361788 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || || |||||||| ||||| | || | | |||| |||||| Sbjct 361787 ATCCAGAAGGAGTCCACTCTACATCTCGTGCTGCGCCTGCGCGGAGGA 361740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338007659719268