Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq465 158 2e-33 >seq465 Length=132516 Score = 158 bits (174), Expect = 2e-33 Identities = 1126/1795 (63%), Gaps = 65/1795 (4%) Strand=Plus/Plus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||| || ||||||| || || | | ||||| || |||||||| || || || | | Sbjct 112117 GTGAATTGGATGGGAGCAGAGGCGGCCATGGTACGAAGGTAGTACATGCCGGTCTTCAAA 112176 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || || |||| ||| |||||||||| || | || | || || || Sbjct 112177 CCGAGCTTCCAGCCGGCGAAATGCATGGAAGTGATCTTACCCATGGTGGGCTCCTTCATG 112236 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 || || |||| |||||| |||||||||||| || || | ||||| ||||| | || Sbjct 112237 TGGATGTTCAATGACTGAGATTGATCGATGAAGGCACCGCGGTCAGCAGCCATCTGGATG 112296 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 ||||| || | |||||||| | || ||| ||| ||| | || ||||| | Sbjct 112297 ATGGTACGCTGCGAGATTTCCCATACGGTCTTGTAAAGGGTCTTGGTCTCTTCTGGGATG 112356 Query 75617 TTTGT-AT--TTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 || | || | || ||||| || ||||| | || || ||||| || | ||| | Sbjct 112357 TTGGGGATCCTCTGGATGGAACCACCATCTGCAATGATACGGTTCTTCATGTTCTCAGAC 112416 Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733 || | | ||| | | | ||||| ||| || || | || || || ||| Sbjct 112417 CAGAGACCCATGTCGACGAGGTCCTTGAGGAGCCAAGGGTTGACGACCTGGAACTCACCA 112476 Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793 | || || | || | ||| || || ||| ||||| || | | || |||||||| Sbjct 112477 GCCAGCACACGACGTGAGTAGATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGTTTCCA 112536 Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 75853 | ||| || | ||| || ||||| ||||| || || |||| | | || | | |||| Sbjct 112537 AGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAACCAGGAGAGAGTTGCGCACACCA 112596 Query 75854 TG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912 || || | ||| || || || | | ||| |||||||| || || || || | Sbjct 112597 TGCTGAGC-GATCTTGTCCTTCAACGAAGCCCAGTCCCAAAGGTCAGAAGGAGTCACGCC 112655 Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972 |||||||||||| || || || ||| || || || | ||||| | || | Sbjct 112656 CCAGAGATCGTACTGAAGCTGACCCTTGGACACAGGCGAACCCTCGTATGTAGCATATGG 112715 Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAA 76032 || || | || | ||||| || | | || ||| |||||||| ||||| Sbjct 112716 ACCAAGCTCCTTGGCGATATCGCAGGACGACGTGAGAGCCGCGTGGTAAATTGTCTCGAA 112775 Query 76033 AATCTTCTTATTAAGAT-CTTGCGCTTCAAGACTA-TCAAAAGGATAATGTAAAAGAATA 76090 |||| | || || | |||| |||||| | | | |||||||| | | | | Sbjct 112776 GATCTGGGTGTTGAGCTTCTTG-GCTTCA-GTCGACTCAAAAGGCAGACGAAGGGCGAGG 112833 Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150 || ||||| || || |||||||| |||| ||| || || ||||| | ||||||| Sbjct 112834 AAAGCATCAGCAAGACCCTGAACACCAAGACCGATGGGCCTATGGC-------GGAAATT 112886 Query 76151 TCAGCTTCTGGAAT-------AGGGTAATAATTAATATCTATAATTTTATTGAGATTTC- 76202 | || | | | |||||| | || | || || || || ||||| || | Sbjct 112887 GCTGCGGCGTGCCTCCTCCACAGGGTAGTGGTTGACCTCGATGATCTTGTTGAGGTTACG 112946 Query 76203 --TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA----TCTA 76256 |||| || | | ||| ||| || ||| | || || || | ||| | || Sbjct 112947 TGTGACGACCATGGTCACCTCGTGG---AGCTTGTGGAAGTCGAACTCGCCACGCTTGTA 113003 Query 76257 -TC-ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATT 76314 || ||||| ||| || | || || || || || ||||| ||||||| || | Sbjct 113004 GTCGACAAAGGATGGAAGGGCGAGGGAAGCCAGGTTGCACACGGCGACCTCATCAGGAGC 113063 Query 76315 GGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTG 76374 | | | | ||||| ||||| || || | || || || || || | || Sbjct 113064 AGTGAACTCGACAATCTCAGTGCAGAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTG 113123 Query 76375 GTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTG 76434 |||| ||| |||| || | |||||| || || | ||||| | ||||| ||| |||| Sbjct 113124 GTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGCATGAACGGGTTGCCAGTCTCAGTCTG 113183 Query 76435 TGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGC----- 76489 | |||| ||| | | ||||| |||| | || || |||| Sbjct 113184 CGCCTCGAGAATGGCGTACCAGA--------GCTTCTGGGCACGAACAGTCTCGCGACCC 113235 Query 76490 ---TTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCC 76546 ||||| | || || | || || | | || || ||||| || | || || | Sbjct 113236 TTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCTCGAACTCATCGCCGTAGACGTCGGCA 113295 Query 76547 AAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTC 76606 | |||||| || || || || ||||| | || |||||| || | || | || || ||| Sbjct 113296 AGACCAGGGCACTCGTTGGGGCACATGAGTGTCCACTCGCCGTTCTCTTGCACTCGCTTC 113355 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTC-TACGTTCTTCATT 76665 || |||||||| || ||||| || || || || || || | || ||| | |||| || Sbjct 113356 ATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGAGGTCACGAGCTCGTACCT-CTTCCTT 113414 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || ||||| || || ||||| | | | ||| | |||||||| || || || Sbjct 113415 ACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATACATCCGCGTGCCATGGCTCGAGGTA 113474 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 || || | | |||| || || || || || |||||||| | || | || ||||| || Sbjct 113475 GATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTT 113534 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 || || | | ||| || || | || || ||||| || || || ||| ||| || Sbjct 113535 GTAGACACGGAGCATCGGGATGAGACCATTGGATGTTCCGTTGGTGCCACCAATGTAGGA 113594 Query 76846 TCCACATGCACGAATAT--TACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 || ||||| || | | || || | || || || || || | || ||||| Sbjct 113595 GCCGGTGGCACGGATGCGGTGCACATTGA--GTCCAATGCCGCCAGCGGTCTTGGAGATC 113652 Query 76904 AGAGCACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 76962 | ||||| ||| |||| |||||| ||||| || || || || || ||| |||||| | Sbjct 113653 AACGCACA-CGTCTTCAGTGTGTCGTAGATACCGTCGATGCTGTCCTCCTTCATGTCGAT 113711 Query 76963 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGC 77022 || || ||| ||||| ||| | | ||||| || || |||| ||||| || || Sbjct 113712 GAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCCCGCGTTGAACAGCGTAGGCGAGGC 113771 Query 77023 ATGAGTGAACCATTTTTCAGAAA-GTAGATTGTATGTTTCAATAACTGCTTCTATATCCC 77081 ||| ||||| | |||| || | |||| | ||| || ||||| | ||||| || | Sbjct 113772 ATGTGTGAAGTACTTTTGCGACATGTAG-TCGTAGGTCTCAATGGC--CTTCTCAATGTC 113828 Query 77082 ATTG--ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACA 77134 | | ||| || || || ||||||||||| | ||| ||||| || || ||| || Sbjct 113829 TTCGCCATGGATGCCAACGGCGACACGCATGAGCATGTGCTGTGGGCGCTCTGCA 113883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930202598720