Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq113 114 3e-20 >seq113 Length=382967 Score = 114 bits (126), Expect = 3e-20 Identities = 154/211 (73%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| ||||| || || |||||||| |||| | ||| | ||||| || | Sbjct 361533 CAAG-TGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCCA 361591 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || || ||||| || | ||||||||||| | ||| || ||||| || || Sbjct 361592 GCTGCTTT--CCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTG 361649 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || |||||| | || | | | || || ||||||||| || || || || || Sbjct 361650 GATCTTCGATTTGACGTTGTCAATGGTATCGGATGACTCTACTTCTAGCGTGATGGTCTT 361709 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| ||||| ||||||| ||||||| Sbjct 361710 TCCAGTGAGCGTCTTGACGAAGATCTGCATT 361740 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| ||||| ||||| || ||||||||||| || | | || | || || Sbjct 361756 AGCACGAGATGTAGAGTGGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCC 361815 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||| ||||| | | ||||||||||| | || || ||||| || Sbjct 361816 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 361875 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | |||| || |||||||||||| || || || Sbjct 361876 TGGATCTTGCTCTTGACGTTGTCGATTGTGTCGGATGACTCTACTTCAAGCGTGATGGTC 361935 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 361936 TTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 361967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153813837052041