Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq887 107 2e-18 >seq887 Length=503426 Score = 107 bits (118), Expect = 2e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||||||| ||| || | || ||||| | | ||||||||||| || || ||||| Sbjct 202215 CAAGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAAATTAACTCGTTGGAGAAGGTAAGT 202156 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || | ||| || || || || || | ||| || |||| ||| ||||||||| ||||| Sbjct 202155 CCGGCCATGAGGCCACGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCACTGAAGAAG 202096 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCT 16388 ||||| ||||| ||||| ||||||||||| |||| Sbjct 202095 ATACCCTCAACGGCGGCGAATGCAACCAAGCGCT 202062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462506652205000