Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq112 82.4 8e-11
>seq112
Length=719005
Score = 82.4 bits (90), Expect = 8e-11
Identities = 132/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614
||| || |||| || ||||| ||||| ||||| ||||| | |||| ||| ||
Sbjct 202646 AACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAGAGGGTGCGACCGTCCTC 202705
Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674
|||||| || || || | |||| |||||||||||| ||||| |||||||| ||||| |
Sbjct 202706 GAGCTGCTTTCCGGCGAAAATCAAACGTTGCTGATCCGGAGGAATGCCTTCCTTGTC-TT 202764
Query 139675 GATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733
|| | || | ||| | | || | ||||| | | ||| ||||||| || | ||||
Sbjct 202765 GAATCTTGGATTTGACATTGTCGATAGTGTCAGAAGACTCTACCTCAAGAGTGATGGTCT 202824
Query 139734 TGCCGGT 139740
| || ||
Sbjct 202825 TCCCAGT 202831
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496058264260000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |