Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq112 107 1e-18
>seq112
Length=719005
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969
|||||||| || || |||||||| ||||| || || || ||| | || ||| ||||
Sbjct 201907 AACACCAAGTGCAGTGTGCTCTCCTTTTGGATGTTGTAGTCGCTCAACGTACGGCCATCC 201966
Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029
||||| || || || || || ||||| || |||||||| | || | ||| || |||||
Sbjct 201967 TCCAACTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGTGGAATACCCTCCTTATCC 202026
Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089
||| ||| || || || ||| || || | | ||| || || | ||||| ||
Sbjct 202027 TGAATCTTTGACTTAACATTATCAATTGTGTCGGATGACTCAACCTCTAATGTAATAGTC 202086
Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || || |||||||||||||| || |||||
Sbjct 202087 TTTCCAGTCAAAGTCTTCACAAAGATCTGCAT 202118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354773600436900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |