Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq444 84.2 2e-11
>seq444
Length=601236
Score = 84.2 bits (92), Expect = 2e-11
Identities = 116/160 (73%), Gaps = 2/160 (1%)
Strand=Plus/Plus
Query 5329 TAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAG-TTAAACA 5387
|||||| || | | ||||||| ||||||||| || || || | || | | || || |
Sbjct 430546 TAGCTGCGCGACACGATCTCCCTCCTTAACCTCGAAATC-CTTCTCCCCATGATTGAAAA 430604
Query 5388 GCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAA 5447
| | || ||| | ||| |||||||| |||| || ||||| |||||| ||||| |
Sbjct 430605 GTAGTACTTTGACCTGGCCCCGGTAGTCCGCGTCAATCACGCCTGCGCCCGTATCGATCA 430664
Query 5448 AGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCC 5487
||||||| ||||||||||| ||||| ||||| || ||
Sbjct 430665 TGTGTTTGGATGCAAGGCCGGAGCGTGGCGCTATACGACC 430704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447745222886000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |