Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq444 84.2 2e-11 >seq444 Length=601236 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 5329 TAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAG-TTAAACA 5387 |||||| || | | ||||||| ||||||||| || || || | || | | || || | Sbjct 430546 TAGCTGCGCGACACGATCTCCCTCCTTAACCTCGAAATC-CTTCTCCCCATGATTGAAAA 430604 Query 5388 GCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAA 5447 | | || ||| | ||| |||||||| |||| || ||||| |||||| ||||| | Sbjct 430605 GTAGTACTTTGACCTGGCCCCGGTAGTCCGCGTCAATCACGCCTGCGCCCGTATCGATCA 430664 Query 5448 AGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCC 5487 ||||||| ||||||||||| ||||| ||||| || || Sbjct 430665 TGTGTTTGGATGCAAGGCCGGAGCGTGGCGCTATACGACC 430704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447745222886000