Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq61 84.2 2e-11 >seq61 Length=91600 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || ||| | || ||| |||| || ||| | Sbjct 25791 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCG 25850 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||| |||||||| || || || || Sbjct 25851 GACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGCATTCCACCTGACCAG 25910 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | || ||||||||||| ||||| | | | | | || ||| || ||| Sbjct 25911 CAACGTCTAATCTTCGCTGGCAAGCAACTTGAAGACGGCCGCACCCTCTCCGACTACAAC 25970 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 || || || || || || ||||| Sbjct 25971 ATCCAGAAGGAGTCAACTCTTCAT 25994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429931153143375