Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq887 118 2e-21 >seq887 Length=503426 Score = 118 bits (130), Expect = 2e-21 Identities = 179/253 (71%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTG--CGACGCTATTCCATGCCG 243560 ||||||| || || ||||||| ||| |||| || |||| ||| ||| |||| || Sbjct 202269 TCATCACTGAGGCTGTTGAAATCGAGCAGGAGTT--TTTGACCGAGGCTCTTCCTTGTGC 202326 Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| | ||||||||||| | || ||| || ||||| || || || || || || | Sbjct 202327 TCTTCTCGGCATGAACTCCAACCTGATGAAGCAATACATTGAGTTTGTTGCTGATCGTCT 202386 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | || | || ||||| | || ||||| ||||| || ||||| || | ||| ||||| Sbjct 202387 TCTCCTTGCCCTTGGCAACGACAAAGTCTACAAATCTGCCAACCCATTCGACTTCATGGA 202446 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACG 243740 | ||| || ||| || || || |||||||| || |||||||| ||||||| ||| Sbjct 202447 GAACATCTCTCTTGCCGGCAAGACAAACTTCTTTGAGAAGCGTGTTGGTGATTACCAAAA 202506 Query 243741 CCCTGGTGTGATG 243753 ||||||| ||| Sbjct 202507 GGCTGGTGTCATG 202519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102866929148750