Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq887 118 2e-21
>seq887
Length=503426
Score = 118 bits (130), Expect = 2e-21
Identities = 179/253 (71%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 243503 TCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTG--CGACGCTATTCCATGCCG 243560
||||||| || || ||||||| ||| |||| || |||| ||| ||| |||| ||
Sbjct 202269 TCATCACTGAGGCTGTTGAAATCGAGCAGGAGTT--TTTGACCGAGGCTCTTCCTTGTGC 202326
Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620
||| | ||||||||||| | || ||| || ||||| || || || || || || |
Sbjct 202327 TCTTCTCGGCATGAACTCCAACCTGATGAAGCAATACATTGAGTTTGTTGCTGATCGTCT 202386
Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680
| || | || ||||| | || ||||| ||||| || ||||| || | ||| |||||
Sbjct 202387 TCTCCTTGCCCTTGGCAACGACAAAGTCTACAAATCTGCCAACCCATTCGACTTCATGGA 202446
Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACG 243740
| ||| || ||| || || || |||||||| || |||||||| ||||||| |||
Sbjct 202447 GAACATCTCTCTTGCCGGCAAGACAAACTTCTTTGAGAAGCGTGTTGGTGATTACCAAAA 202506
Query 243741 CCCTGGTGTGATG 243753
||||||| |||
Sbjct 202507 GGCTGGTGTCATG 202519
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102866929148750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |