Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq411 233 2e-56
seq887 111 2e-19
>seq411
Length=256942
Score = 233 bits (258), Expect = 2e-56
Identities = 1084/1688 (64%), Gaps = 53/1688 (3%)
Strand=Plus/Plus
Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624
||||||| |||||| || ||| ||| |||||| ||||||||||| |||||||| |
Sbjct 121119 TGAACTGGATGGGTGCCGAAGCAGCCATTGTTCGGAGATAGTACATCCCAGTCTTGAGGC 121178
Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684
|| |||||| | | |||||| || | |||| | ||| ||| | ||||
Sbjct 121179 CCAACTTCCAACCTGCAAAATGCATACTGGTGATCTTGCCCATTGTAGGATCCTTCATGT 121238
Query 113685 AGAGGTTCATACTTTGGGATTGATCGATG-AAGCGTCCACGATCCGCCGCCATATCAATC 113743
|| |||||| ||| |||||||| ||| |||| |||||||| || ||||| | |
Sbjct 121239 GGATGTTCATTGATTGAGATTGATCAATGTAAGCA-CCACGATCGGCAGCCATCTGGACG 121297
Query 113744 ACATCCTTCATCTT---GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 113800
| | | | || ||||||||| || || ||||||| ||| || ||| ||||
Sbjct 121298 A--TGGTACG-CTGAGAGATTTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCAGCTGGA 121354
Query 113801 ATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 113860
|| | | |||||| || || ||||| | || || || |||||| | | |
Sbjct 121355 ATGTTAGGAACATTTTGAATCGAACCACCATCTGCGATGATTCTATTCTTCATGTTGTCT 121414
Query 113861 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACT 113918
||||| || || || | ||||||| || | ||| | |||| || ||||
Sbjct 121415 GACCATAGTCCCATATCAACAAGATCCTTCAACAACCATGGGT--TGACGACTTGGAACT 121472
Query 113919 CACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 113977
| || ||||| || | ||| ||||| |||| ||||||||||| ||||| || |||
Sbjct 121473 CTCCAGCGAGCACACGACG-AGAGTAGATGTTGGAGGTGTATGGCTCGAAGCATTCGTTG 121531
Query 113978 TTACCCAAGATTTGGGC-GGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 114036
|||||||| || | | ||| ||| |||||||| || || | || | ||||| ||
Sbjct 121532 A-ACCCAAGAATTTGACTGGTACTGGCAGTGGGCATAGGAGCAACAAGCAAACTGTTGCG 121590
Query 114037 GAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGC--TTTGTC 114094
|| ||| | || | | || ||| ||| || | ||||| || || || | || |
Sbjct 121591 GATACCATATTGCTTGATTTGTTGCTTCAGAGAATCCCAATCCCAGA-GATCAGTTGGAG 121649
Query 114095 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTC 114154
| | | ||||||||| | || || ||| | ||| |||| |||||||| |||||
Sbjct 121650 TGACACC-CCACATATCGTATTGAAGCTCACCCTTCGAGACTGGAGATCCCTCGTATGTC 121708
Query 114155 TCGTATGGGCCCTCAACCTCC---GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATAC 114211
|||||||| || || || | || | || | || | || ||||| ||
Sbjct 121709 TCGTATGGTCC---AAGCTTCTTAGCGAGATCAACGGAAGCAGTCAAAGCGGCGTGGTAG 121765
Query 114212 ATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGG 114271
|| |||||||| || | || | ||||||||| || || || | || ||
Sbjct 121766 ATAGTCTCAAAGATCTGGATGTTGAGATGCTTGGCCTCAGGTGACTCGAATGGCAGACG- 121824
Query 114272 CACAAAATA-AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 114330
|| | | || ||||| || |||||||| ||||| || |||| || | || | |
Sbjct 121825 CAGAGCCAAGAAGACATCAGCAAGACCTTGAACACCAAGAGCAATAGGTCTGTGACGGAA 121884
Query 114331 ATTAGACTTTCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 114389
|| || || || ||| | | || || | || ||||| | | | || || |
Sbjct 121885 GTTGGATTTCTTTGCT-TCTGGAACTGGGTAGTAGTTGACCTCGATGATCTTGTTCAGGT 121943
Query 114390 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 114449
| ||| ||||||| || || || ||||| | | | ||| | | | || | ||
Sbjct 121944 TCTTGACCACAACCTGGCAGACCTCGTGGAGCTTCTGGAAGTCATAGGTACC-GT-TGTT 122001
Query 114450 CATTG--ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507
||| || || | ||||| || || || |||| ||||| || | ||||||
Sbjct 122002 CATGTCAACGTAGGTGGGAAGCGCCATGGATGCCAAGTTACAGCAAGCGACCTCATCTGG 122061
Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567
| | |||||| | ||| || || |||| || || || |||||| || | |||||
Sbjct 122062 TGCGGAGTACTCGACAATCTCAGTGCACAGGTTGGAGCTTCGAATGGTACCGAGATTCTT 122121
Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627
|| || |||| ||| || ||||||||||| |||||| | || | || ||||| ||
Sbjct 122122 CTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTTCCAGTCTCGGT 122181
Query 114628 TTGGGACTTGAGAATAGCCTTCCAGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGC- 114685
||||| | |||||| | | ||| | | | | | || | ||| ||| | |
Sbjct 122182 TTGGGCTTCGAGAATGGAGTACCAAAGTTTCTGTGCCTTGA----TGGTCTTGCGACCCT 122237
Query 114686 --CCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGA 114743
||||| |||| ||||| ||| || || || || || ||||| | | |||| |
Sbjct 122238 TGCCCTCAGCCTCATACTTCTCGTATAGAGCCTCGAATTCATCACCATAGACATCTGCAA 122297
Query 114744 GCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCA 114803
| ||||| || | ||||| | || | |||| ||| || |||||||||||||
Sbjct 122298 GACCTGGGCACTCGTTGGGGCACATCAGTGTCCATGTGCCATTCTTTTCAACACGCTTCA 122357
Query 114804 TGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 114863
|||| || ||||||||||||||||| |||||||||| ||| |||| ||||||| | |
Sbjct 122358 TGAACAGATCTGGGATCCAGAGAGCGTAGAAGAGATCACGAGCGCGAACTTCTTCCTTGC 122417
Query 114864 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 114923
| ||||| || | || | | || | | ||| |||||||| || || ||||| |
Sbjct 122418 CGTGATTTTTTCGGAGATCAAGGTACTCGAAAACATCTGCGTGCCATGGCTCGAGGTAGA 122477
Query 114924 CCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977
|||| || || | | || ||| |||||| ||||| || || ||| |
Sbjct 122478 TGGCGAATGCACC---AGGTCGCTTGTTTCCACCCTGGTCAACATATCTGGCAGTGTTGT 122534
Query 114978 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG 115037
| || || | ||||| |||| |||||| | || | ||| ||||| || ||| ||
Sbjct 122535 TGAACACTCTGAGCATAGGAACGATACCGTTGGAGTTGCCGTTTGTGCCAGCAATGTAAG 122594
Query 115038 ACTTATTGGCTCTGACATC-ATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATT 115096
|||||| || || |||| | | ||| ||||| || || ||| |||||
Sbjct 122595 CTCCGGTGGCTC-GAATTCTGTGGACATTGAGACCGATACCACCAGCATTCTTAGAGATC 122653
Query 115097 TGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATA 115156
|| || | |||| || ||||||| || || || ||| |||| | | ||
Sbjct 122654 ATGGCACAAGTCTTGAGCGTGTCGTAGATACCATCAATACTATCATCCTTCATGTCAATT 122713
Query 115157 AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCG 115216
| |||||| || | ||||| | |||||| || || |||||| ||||| | |||
Sbjct 122714 AAGAAGCACGAAGAAAGTTGTGCCTGTGGTGTGCCGGCAGCGAAGAGTGTTGGCGAAGCG 122773
Query 115217 TGGATGAA 115224
|| ||||
Sbjct 122774 TGTGTGAA 122781
>seq887
Length=503426
Score = 111 bits (122), Expect = 2e-19
Identities = 297/449 (66%), Gaps = 4/449 (1%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
||| || ||||| |||||||| |||||||||||||| ||| | | ||| ||||||||
Sbjct 202501 GTAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTGCCGGCAAGAGAGATGTTCTCCAT 202442
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 125876
|| || |||||||| || || | | | ||| | |||| ||| ||||
Sbjct 202441 GAAGTCGAATGGGTTGGCAGATTTGTAGACT-TTGTCGTTGCCAAGGGCAAGGAGAAGAC 202383
Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936
|||| | || |||||||||| | |||| | |||||||| |||| || ||
Sbjct 202382 GATCAGCAACAAACTCAATGTATTGCTTCATCAGGTTGGAGTTCATGCCGAGAAGAGCAC 202323
Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996
| || || || || | ||| ||| ||| ||||| || || || | || | |
Sbjct 202322 AAGGAAGAGCCTCGGTCAAAAACTCCTGCTCGATTTCAACAGCCTCAGTGATGACATCTT 202263
Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCT 126055
||| | | | | || | || || |||| |||||| ||||| ||
Sbjct 202262 GAACTGCTTGCTTGCTTGGGCGAT-GCTTCAAGTGAGAGAAGAGGAGGCAAGCAAAGTCA 202204
Query 126056 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGA 126115
||| |||||||||||||| || || | || || |||||| ||||| | ||||||
Sbjct 202203 GTGTGAAGACCCTCGTCACGAGAAATTAACTCGTTGGAGAAGGTAAGTCCGGCCATGAGG 202144
Query 126116 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACA 126175
|| ||||||||||||||||| || | |||||||| ||||||||| ||||| ||
Sbjct 202143 CCACGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCACTGAAGAAGATACCCTCAACG 202084
Query 126176 CACGCGAACGCAAAGAGACGCTCAGCAAA 126204
||||| |||| | |||| ||||||
Sbjct 202083 GCGGCGAATGCAACCAAGCGCTGAGCAAA 202055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597346693099000
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