Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq61 98.7 7e-16
>seq61
Length=91600
Score = 98.7 bits (108), Expect = 7e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032
|||||| || || || || || |||||||| ||| ||| | | ||||||| | |||
Sbjct 25994 ATGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTG 25935
Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092
||||||||| | || | ||| || ||||| |||||| ||||||||||| ||| ||
Sbjct 25934 CTTGCCAGCGAAGATTAGACGTTGCTGGTCAGGTGGAATGCCTTCCTTGTCTTGAATCTT 25875
Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152
| || ||| | || || || || | || || || | ||| |||||||| || ||
Sbjct 25874 GGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGT 25815
Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176
|| || || ||||| || |||||
Sbjct 25814 GAGGGTCTTGACAAAGATCTGCAT 25791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357387970963625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |