Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq61 98.7 7e-16 >seq61 Length=91600 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| || || || || || |||||||| ||| ||| | | ||||||| | ||| Sbjct 25994 ATGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCAAGTTG 25935 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||||||| | || | ||| || ||||| |||||| ||||||||||| ||| || Sbjct 25934 CTTGCCAGCGAAGATTAGACGTTGCTGGTCAGGTGGAATGCCTTCCTTGTCTTGAATCTT 25875 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || || || || | || || || | ||| |||||||| || || Sbjct 25874 GGACTTGACATTGTCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATGGTTTTGCCCGT 25815 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| || ||||| Sbjct 25814 GAGGGTCTTGACAAAGATCTGCAT 25791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357387970963625