Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq887 105 1e-17 >seq887 Length=503426 Score = 105 bits (116), Expect = 1e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || |||||||| |||||||| ||| || |||||||| ||||| || ||||||||||| Sbjct 202224 AAGAGGAGGCAAGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAAATTAACTCGTTGGAG 202165 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | || || | ||||| |||||| || | ||| || || | || || | ||| Sbjct 202164 AAGGTAAGTCCGGCCATGAGGCCACGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCA 202105 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || || ||||| ||||| ||||| || || || || | | || | |||| | || Sbjct 202104 CTGAAGAAGATACCCTCAACGGCGGCGAATGCAACCAAGCGCTGAGCAAATGTGGATGAC 202045 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTT 160131 |||| ||| |||| | | ||||| || |||||||| Sbjct 202044 TTGTCTTGGATCCATCGTACAGCCCAGTCGGCCTTCTT 202007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795146006018000