Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq887 105 1e-17
>seq887
Length=503426
Score = 105 bits (116), Expect = 1e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973
|| |||||||| |||||||| ||| || |||||||| ||||| || |||||||||||
Sbjct 202224 AAGAGGAGGCAAGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAAATTAACTCGTTGGAG 202165
Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033
| | | || || | ||||| |||||| || | ||| || || | || || | |||
Sbjct 202164 AAGGTAAGTCCGGCCATGAGGCCACGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCA 202105
Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093
|| || ||||| ||||| ||||| || || || || | | || | |||| | ||
Sbjct 202104 CTGAAGAAGATACCCTCAACGGCGGCGAATGCAACCAAGCGCTGAGCAAATGTGGATGAC 202045
Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTT 160131
|||| ||| |||| | | ||||| || ||||||||
Sbjct 202044 TTGTCTTGGATCCATCGTACAGCCCAGTCGGCCTTCTT 202007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795146006018000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |