Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq533 96.9 4e-15 >seq533 Length=226427 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 153242 AGTCATACAGCGAAACGTTCTTGAGAA--TCCTAGTTGGTACACATCTTACACTCCCTAT 153299 |||||| |||| || || |||| ||| ||| | ||||||||| |||||||| ||| Sbjct 30604 AGTCATCAAGCGGAATGT-CTTG-GAAGGTCCAGGATGGTACACAAGCTACACTCCATAT 30547 Query 153300 CAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACA 153359 ||| | || || ||| || | | ||| || | || |||| |||||| || | Sbjct 30546 CAACCAGAAATCAGTCAAGGGCGCCTTGAATCTCTTTTGAATTTCCAAACTCTTGTTTGT 30487 Query 153360 GAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCA 153419 || || |||| ||||| || ||||||||||||| || || |||| ||||| |||||| Sbjct 30486 GATCTCACAGCTTTACCGATTTCAAACGCATCTCTCTTGGACGAAGGTACTGCCGCAGCA 30427 Query 153420 GAAGCAATG 153428 ||||||||| Sbjct 30426 GAAGCAATG 30418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579206102852000