Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq533 96.9 4e-15
>seq533
Length=226427
Score = 96.9 bits (106), Expect = 4e-15
Identities = 137/189 (72%), Gaps = 4/189 (2%)
Strand=Plus/Minus
Query 153242 AGTCATACAGCGAAACGTTCTTGAGAA--TCCTAGTTGGTACACATCTTACACTCCCTAT 153299
|||||| |||| || || |||| ||| ||| | ||||||||| |||||||| |||
Sbjct 30604 AGTCATCAAGCGGAATGT-CTTG-GAAGGTCCAGGATGGTACACAAGCTACACTCCATAT 30547
Query 153300 CAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACA 153359
||| | || || ||| || | | ||| || | || |||| |||||| || |
Sbjct 30546 CAACCAGAAATCAGTCAAGGGCGCCTTGAATCTCTTTTGAATTTCCAAACTCTTGTTTGT 30487
Query 153360 GAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCA 153419
|| || |||| ||||| || ||||||||||||| || || |||| ||||| ||||||
Sbjct 30486 GATCTCACAGCTTTACCGATTTCAAACGCATCTCTCTTGGACGAAGGTACTGCCGCAGCA 30427
Query 153420 GAAGCAATG 153428
|||||||||
Sbjct 30426 GAAGCAATG 30418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579206102852000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |