Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5 159 5e-33 >seq5 Length=149557 Score = 159 bits (176), Expect = 5e-33 Identities = 136/165 (82%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 2035592 GTGGGACAAGGCCTTT-TGCGAGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCG 2035650 ||||||| || ||| ||| ||||||||||| | ||||||||| | ||||||||| Sbjct 67434 GTGGGACCAGAAATTTATGC-AGGTCGACCAAGAGATGCTCTTTGAGATCATCCTCGCCT 67376 Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710 |||||||||| || |||||||| ||||| ||| | || ||||||||||| ||||| | | Sbjct 67375 CCAACTACCTGGATATCAAGCCTCTCCTTGATGTAGGATGCAAGACCGTCGCCAATATGA 67316 Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 ||||||||||||| || ||||| |||||||| ||||||||||||| Sbjct 67315 TCAAGGGCAAGTCACCAGAGGAGATCCGCAAAACCTTTAACATCA 67271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916148003531075