Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq887 91.5 1e-13 >seq887 Length=503426 Score = 91.5 bits (100), Expect = 1e-13 Identities = 130/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| || || | |||| ||| ||||| ||||| |||||||| Sbjct 201788 GCTCGACCAAGTTCTCGTTAACAATACCATCGGAGGCGGCGAAGAAGGCAAGAACGTGAG 201729 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 || ||| |||| || | || || ||||| ||||||||||| | || ||||||||||| Sbjct 201728 AAATGAAGTATCGCTCGTCATCATTGAGTTTGTTGTTCCAGTCATGAAGGTCCTTGGACA 201669 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||| ||||| || | ||||| | | | |||||||||||| |||| |||| Sbjct 201668 GGTCAATCTCCTCTGCGGTCCAGAATGATGCCTCGGCCTTCTTGTACATCTGCC--AGAT 201611 Query 110892 CT 110893 || Sbjct 201610 CT 201609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445089253596000