Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq411 239 6e-58
seq887 118 1e-21
>seq411
Length=256942
Score = 239 bits (264), Expect = 6e-58
Identities = 1087/1688 (64%), Gaps = 53/1688 (3%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||| |||||| || ||| ||| |||||| ||||||||||| |||||||| |
Sbjct 121119 TGAACTGGATGGGTGCCGAAGCAGCCATTGTTCGGAGATAGTACATCCCAGTCTTGAGGC 121178
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
|| |||||| | | |||||| || | |||| | || ||| | ||||
Sbjct 121179 CCAACTTCCAACCTGCAAAATGCATACTGGTGATCTTGCCCATTGTAGGATCCTTCATGT 121238
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATG-AAGCGTCCCCGATCCGCCGCCATATCAATC 117983
|| |||||| ||| |||||||| ||| |||| || ||||| || ||||| | |
Sbjct 121239 GGATGTTCATTGATTGAGATTGATCAATGTAAGCA-CCACGATCGGCAGCCATCTGGACG 121297
Query 117984 ACATCCTTCATCTT---GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040
| | | | || ||||||||| || ||| ||||||| ||| || ||| ||||
Sbjct 121298 A--TGGTACG-CTGAGAGATTTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCAGCTGGA 121354
Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 118100
|| | | |||||| || || ||||| | || || || |||||| | | |
Sbjct 121355 ATGTTAGGAACATTTTGAATCGAACCACCATCTGCGATGATTCTATTCTTCATGTTGTCT 121414
Query 118101 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACT 118158
||||| || || || | ||||||| || | ||| | |||| || ||||
Sbjct 121415 GACCATAGTCCCATATCAACAAGATCCTTCAACAACCATGGGT--TGACGACTTGGAACT 121472
Query 118159 CACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 118217
| || ||||| || | ||| ||||| |||| ||||||||||| ||||| || |||
Sbjct 121473 CTCCAGCGAGCACACGACG-AGAGTAGATGTTGGAGGTGTATGGCTCGAAGCATTCGTTG 121531
Query 118218 TTACCCAAGATTTGGGCTG-TGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276
|||||||| || | ||| | ||| |||||||| || || | || | ||||| ||
Sbjct 121532 A-ACCCAAGAATTTGACTGGTACTGGCAGTGGGCATAGGAGCAACAAGCAAACTGTTGCG 121590
Query 118277 GAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGC--TTTGTC 118334
|| ||| | || | | || ||| ||| |||| ||||| || || || | || |
Sbjct 121591 GATACCATATTGCTTGATTTGTTGCTTCAGAGAATCCCAATCCCAGA-GATCAGTTGGAG 121649
Query 118335 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 118394
| | | ||||||||| | || || ||| | || |||| |||||||| |||||
Sbjct 121650 TGACACC-CCACATATCGTATTGAAGCTCACCCTTCGAGACTGGAGATCCCTCGTATGTC 121708
Query 118395 TCATATGGGCCCTCAACCTCC---GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATAC 118451
|| ||||| || || || | || | || | || | || ||||| ||
Sbjct 121709 TCGTATGGTCC---AAGCTTCTTAGCGAGATCAACGGAAGCAGTCAAAGCGGCGTGGTAG 121765
Query 118452 ATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGG 118511
|| || ||||| || | || | ||||||||| || || || | || ||
Sbjct 121766 ATAGTCTCAAAGATCTGGATGTTGAGATGCTTGGCCTCAGGTGACTCGAATGGCAGACG- 121824
Query 118512 CACAAAATA-AATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 118570
|| | | || ||||| || |||||||| ||||| || |||| || | || | |
Sbjct 121825 CAGAGCCAAGAAGACATCAGCAAGACCTTGAACACCAAGAGCAATAGGTCTGTGACGGAA 121884
Query 118571 ATTAGACTTCCGAGCGGTCTCCA-CGGGATAAAAATTCCTATCGATAACCCTATTTAGAT 118629
|| || ||| || ||| | | || || | || ||||| | | | || || |
Sbjct 121885 GTTGGATTTCTTTGCT-TCTGGAACTGGGTAGTAGTTGACCTCGATGATCTTGTTCAGGT 121943
Query 118630 TTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTT 118689
| ||| ||||||| || || || ||||| | | | ||| | | | || | ||
Sbjct 121944 TCTTGACCACAACCTGGCAGACCTCGTGGAGCTTCTGGAAGTCATAGGTACC-GT-TGTT 122001
Query 118690 CATTG--ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 118747
||| || || | ||||| || || || |||| ||||| || | ||||||
Sbjct 122002 CATGTCAACGTAGGTGGGAAGCGCCATGGATGCCAAGTTACAGCAAGCGACCTCATCTGG 122061
Query 118748 ATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTT 118807
| | |||||| | ||| || ||||||| ||| || || |||||| || | |||||
Sbjct 122062 TGCGGAGTACTCGACAATCTCAGTGCACAGGTTGGAGCTTCGAATGGTACCGAGATTCTT 122121
Query 118808 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 118867
|| || |||| ||| || ||||||||||| |||||| | || | || ||||| ||
Sbjct 122122 CTGGTTGCTCTTTCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTTCCAGTCTCGGT 122181
Query 118868 TTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGC-- 118925
||||| | |||||| | | ||| | | | | || | ||| ||| | |
Sbjct 122182 TTGGGCTTCGAGAATGGAGTACCAAAGTTT--CTG-TGCCTTGATGGTCTTGCGACCCTT 122238
Query 118926 -CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAG 118984
||||| |||| ||||| ||| || || || || || ||||| | | |||| ||
Sbjct 122239 GCCCTCAGCCTCATACTTCTCGTATAGAGCCTCGAATTCATCACCATAGACATCTGCAAG 122298
Query 118985 CCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 119044
||||| || | ||||| | || | |||| ||| || ||||| ||||||||
Sbjct 122299 ACCTGGGCACTCGTTGGGGCACATCAGTGTCCATGTGCCATTCTTTTCAACACGCTTCAT 122358
Query 119045 GAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 119104
||| || |||||||||||||| || |||||||||| ||| |||| ||||||| | ||
Sbjct 122359 GAACAGATCTGGGATCCAGAGAGCGTAGAAGAGATCACGAGCGCGAACTTCTTCCTTGCC 122418
Query 119105 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 119164
||||| || | || | | || | | ||| |||||||| || || ||||| |
Sbjct 122419 GTGATTTTTTCGGAGATCAAGGTACTCGAAAACATCTGCGTGCCATGGCTCGAGGTAGAT 122478
Query 119165 CGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTT 119218
|||| || || | | || ||| |||||| ||||| || |||||| |||
Sbjct 122479 GGCGAATGCACC---AGGTCGCTTGTTTCCACCCTGGTCAACATATCTGGCAGTGTTGTT 122535
Query 119219 AAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGA 119278
|| || | ||||| |||| |||||| | ||| | ||| ||||| || ||| ||
Sbjct 122536 GAACACTCTGAGCATAGGAACGATACCGTTGGAGTTGCCGTTTGTGCCAGCAATGTAAGC 122595
Query 119279 CTTATTGGCTCTGACATC-GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 119337
|||||| || || ||||| | | ||| ||||| || || ||| |||||
Sbjct 122596 TCCGGTGGCTC-GAATTCTGTGGACATTGAGACCGATACCACCAGCATTCTTAGAGATCA 122654
Query 119338 GCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGA 119397
|| || | |||| || ||||||| ||||| || ||| |||| | | || |
Sbjct 122655 TGGCACAAGTCTTGAGCGTGTCGTAGATACCATCAATACTATCATCCTTCATGTCAATTA 122714
Query 119398 GGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCG 119456
|||||| || | ||| ||||| ||||| || || |||||| ||||| | |||
Sbjct 122715 AGAAGCACGAAGAAAGTTG-TGCCTGTGGTGTGCCGGCAGCGAAGAGTGTTGGCGAAGCG 122773
Query 119457 TGGATGAA 119464
|| ||||
Sbjct 122774 TGTGTGAA 122781
>seq887
Length=503426
Score = 118 bits (130), Expect = 1e-21
Identities = 298/448 (67%), Gaps = 4/448 (1%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || ||||| |||||||| |||||||||||||| ||| | | ||| ||||||||
Sbjct 202500 TAATCACCAACACGCTTCTCAAAGAAGTTTGTCTTGCCGGCAAGAGAGATGTTCTCCATG 202441
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACT-CCAATCTGTTTGAGGAGACG 129846
|| || |||||||| || || | | | || | | |||| ||| |||||
Sbjct 202440 AAGTCGAATGGGTTGGCAGATTTGTAGACTT-TGTCGTTGCCAAGGGCAAGGAGAAGACG 202382
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | || |||||||||| | |||| | ||||||||| |||| || |||
Sbjct 202381 ATCAGCAACAAACTCAATGTATTGCTTCATCAGGTTGGAGTTCATGCCGAGAAGAGCACA 202322
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || | ||| ||| ||| || || ||||| || | || | ||
Sbjct 202321 AGGAAGAGCCTCGGTCAAAAACTCCTGCTCGATTTCAACAGCCTCAGTGATGACATCTTG 202262
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCT 130025
|| | | | ||| || | || || |||| |||||| ||||| ||
Sbjct 202261 AACTGCTTGCTTGCTTGGGCGAT-GCTTCAAGTGAGAGAAGAGGAGGCAAGCAAAGTCAG 202203
Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085
||| |||||||||||||| || || | || || |||||| || || | |||||| |
Sbjct 202202 TGTGAAGACCCTCGTCACGAGAAATTAACTCGTTGGAGAAGGTAAGTCCGGCCATGAGGC 202143
Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145
| ||||||||||||||||| || | ||||| ||| ||||||||| ||||| ||
Sbjct 202142 CACGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCACTGAAGAAGATACCCTCAACGG 202083
Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAA 130173
||||| |||| | |||| ||||||
Sbjct 202082 CGGCGAATGCAACCAAGCGCTGAGCAAA 202055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618428049343000
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