Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq84 84.2 2e-11 >seq84 Length=72079 Score = 84.2 bits (92), Expect = 2e-11 Identities = 118/164 (72%), Gaps = 9/164 (5%) Strand=Plus/Plus Query 139423 TCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTTGTTCTTGGTTTCTCAAAATAAACA 139482 || || || || || || |||||||| ||||| ||||| | || ||||| | ||| Sbjct 29601 TCGGGATCATTGATCAAGCCTTTCCATCCTACTGTTGTGCGGGGCTTCTCGAGGTAAGAC 29660 Query 139483 CGCATAACCAAAAGAAGATTTGGAAATTGTT-TTTGTACTTCGGCTAAACGT-----TCG 139536 |||||||| | ||||||| | ||| | ||| | |||| ||| ||| ||| Sbjct 29661 CGCATAACGATCAGAAGATC---ATCTTGGTATTTCTCCTTCAGCTTGACGAGGCTGTCG 29717 Query 139537 CCGTATTCGAGAGCAGCTTTAGGGTCATGAATTGAACAAGGGCC 139580 | |||||||||||| || |||||||||||||||||| ||||| Sbjct 29718 CAGTATTCGAGAGCGGCGGGAGGGTCATGAATTGAACAGGGGCC 29761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568323028689000