Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_028683.1
Length=177643
Score E
Sequences producing significant alignments: (Bits) Value
seq84 84.2 2e-11
>seq84
Length=72079
Score = 84.2 bits (92), Expect = 2e-11
Identities = 118/164 (72%), Gaps = 9/164 (5%)
Strand=Plus/Plus
Query 139423 TCTGGGTCGTTAATGAAACCTTTCCAACCTACAGTTGTTCTTGGTTTCTCAAAATAAACA 139482
|| || || || || || |||||||| ||||| ||||| | || ||||| | |||
Sbjct 29601 TCGGGATCATTGATCAAGCCTTTCCATCCTACTGTTGTGCGGGGCTTCTCGAGGTAAGAC 29660
Query 139483 CGCATAACCAAAAGAAGATTTGGAAATTGTT-TTTGTACTTCGGCTAAACGT-----TCG 139536
|||||||| | ||||||| | ||| | ||| | |||| ||| ||| |||
Sbjct 29661 CGCATAACGATCAGAAGATC---ATCTTGGTATTTCTCCTTCAGCTTGACGAGGCTGTCG 29717
Query 139537 CCGTATTCGAGAGCAGCTTTAGGGTCATGAATTGAACAAGGGCC 139580
| |||||||||||| || |||||||||||||||||| |||||
Sbjct 29718 CAGTATTCGAGAGCGGCGGGAGGGTCATGAATTGAACAGGGGCC 29761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568323028689000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |