Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq411 286 5e-72
>seq411
Length=256942
Score = 286 bits (316), Expect = 5e-72
Identities = 1200/1879 (64%), Gaps = 33/1879 (2%)
Strand=Plus/Plus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| ||||| || || | || || | |||| || ||||||||||| ||||| || ||
Sbjct 121118 GTGAACTGGATGGGTGCCGAAGCAGCCATTGTTCGGAGATAGTACATCCCAGTCTTGAGG 121177
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|||| |||| || |||||||| || || | ||| ||||||| ||
Sbjct 121178 CCCAACTTCCAACCTGCAAAATGCATACTGGTGATCTTGCCCATTGTAGGATCCTTCATG 121237
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
|| || ||||| || ||| |||||| ||| |||| || | ||| || ||||| | |
Sbjct 121238 TGGATGTTCATTGATTGAGATTGATCAATGTAAGCACCACGATCGGCAGCCATCTGGACG 121297
Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021
||||| |||| |||||||| | || ||| | | ||||| ||| |||||| |
Sbjct 121298 ATGGTACGCTGAGAGATTTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCAGCTGGAATG 121357
Query 77022 TTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078
|| | | |||||||| ||||||||||||| || ||| ||||||| || | || |
Sbjct 121358 TTAGGAACATTTTGAATCGAACCACCATCTGCGATGATTCTATTCTTCATGTTGTCTGAC 121417
Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138
|| | | | | || | | | | | | || || || | ||| || ||||||
Sbjct 121418 CATAGTCCCATATCAACAAGATCCTTCAACAACCATGGGTTGACGACTTGGAACTCTCCA 121477
Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198
| | || | ||||| ||| || || ||| ||||| || | |||| ||| ||
Sbjct 121478 GCGAGCACACGACGAGAGTAGATGTTGGAGGTGTATGGCTCGAAGCATTCGTTGAACCCA 121537
Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258
| ||||||| ||| ||||| |||||||| || || | ||||| || | || ||||
Sbjct 121538 AGAATTTGACTGGTACTGGCAGTGGGCATAGGAGCAACAAGCAAACTGTTGCGGATACCA 121597
Query 77259 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318
| | |||||| | || ||| | | ||||||||| ||||| | || ||| ||
Sbjct 121598 TATTGCTTGATTTGTTGCTTCAGAGAATCCCAATCCCAGAGATCAGTTGGAGTGACACCC 121657
Query 77319 CAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT-GATCCATTATATGTTTCATAAGG 77377
|| | ||||||||| || || || | || | ||||| | ||||| || || ||
Sbjct 121658 CACATATCGTATTGAAGCTCACCCTT-CGAGACTGGAGATCCCTCGTATGTCTCGTATGG 121716
Query 77378 TCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAA 77437
||| | | ||| || ||| || ||| || ||| || || || || ||
Sbjct 121717 TCCAAGCTTCTTAGCGAGATCAACGGAAGCAGTCAAAGCGGCGTGGTAGATAGTCTCAAA 121776
Query 77438 AATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAA 77496
|||| | ||||||| |||| || ||| || || || | | | | | |
Sbjct 121777 GATCTGGATGTTGAGATGCTTG-GCCTCAGGTGACTCGAATGGCAGACGCAGAGCCAAGA 121835
Query 77497 AGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTT 77556
|| |||| || | || ||||| |||| | |||||||||| || | ||||| | |
Sbjct 121836 AGACATCAGCAAGACCTTGAACACCAAGAGCAATAGGTCTGTGACGGAAGTTGGATTTCT 121895
Query 77557 TAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTA 77616
| |||||||||| || || || || | || || || || || || || | || || |
Sbjct 121896 TTGCTTCTGGAACTGGGTAGTAGTTGACCTCGATGATCTTGTTCAGGTTCTTGACCACAA 121955
Query 77617 CTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATAACA--AACAT--G 77672
| | || || | || || | || ||| | | || | | | ||| | |
Sbjct 121956 CCTGGCAGACCTCGTGGAGCTTCTGGAAGTCATAGGTACCGTTGTTCATGTCAACGTAGG 122015
Query 77673 TTCAAAGCT--ATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTA 77730
| |||| || ||||| | ||||| || ||||||| | || || | |
Sbjct 122016 TGGGAAGCGCCATGGATGCCAAGTTACAGCAAGCGACCTCATCTGGTGCGGAGTACTCGA 122075
Query 77731 TTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTT 77790
||||| || || || || | | || || || ||||| | ||||||||||||
Sbjct 122076 CAATCTCAGTGCACAGGTTGGAGCTTCGAATGGTACCGAGATTCTTCTGGTTGCTCTTTC 122135
Query 77791 TATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAA 77850
||||| | ||||| || || || || || | || || || | || | ||||| ||
Sbjct 122136 GGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTTCCAGTCTCGGTTTGGGCTTCGAGAA 122195
Query 77851 TAGATTTCCAGACGACTCTA-GCTTTTATCATAGATTTGTATCGCCT---CTCTCTTTCA 77906
| || | ||| | | ||| || || || | ||| | | | ||| |||
Sbjct 122196 TGGAGTACCAAA-GTTTCTGTGCCTTGATGGTC---TTGCGACCCTTGCCCTCAGCCTCA 122251
Query 77907 TATTGA--GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATT 77964
|| | ||||| |||| || |||||||| || | ||||| | | || ||||| |
Sbjct 122252 TACTTCTCGTATAGAGCC--TCGAATTCATCACCATAGACATCTGCAAGACCTGGGCACT 122309
Query 77965 CATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAG 78024
| || |||||||||| || ||| |||| | | ||| || ||||| || ||||| |
Sbjct 122310 CGTTGGGGCACATCAGTGTCCATGTGCCATTCTTTTCAACACGCTTCATGAACAGATCTG 122369
Query 78025 GTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTT 78084
| ||||| ||||| || ||||| || | | | |||||| || || ||| |||
Sbjct 122370 GGATCCAGAGAGCGTAGAAGAGATCACGAGCGCGAACTTCTTCCTTGCCGTGATTTTTTC 122429
Query 78085 TAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTC 78144
||||| || |||| | || ||| | |||||||| || || || || || | | |
Sbjct 122430 GGAGATCAAGGTACTCGAAAACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAATGCAC 122489
Query 78145 CAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACA 78204
||||||| || || || ||||| || | ||||||||| ||||| || | ||||| | ||
Sbjct 122490 CAGGTCGCTTGTTTCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAACACTCTGAGCA 122549
Query 78205 TTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAA 78264
| |||| |||||||| || | || ||||| |||| ||| ||| ||| | || ||||
Sbjct 122550 TAGGAACGATACCGTTGGAGTTGCCGTTTGTGCCAGCAATGTAAGCTCCGGTGGCTCGAA 122609
Query 78265 TATTACTAATGGATATC----CCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT 78320
| | |||| || || || || || || ||||||| || | || |||
Sbjct 122610 TTCTG----TGGACATTGAGACCGATACCACCAGCATTCTTAGAGATCATGGCACAAGTC 122665
Query 78321 TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380
|| | || ||||||||||| || ||||| |||||| |||||| || | || || |
Sbjct 122666 TTGAGCGTGTCGTAGATACCATCAATACTATCATCCTTCATGTCAATTAAGAAGCACGAA 122725
Query 78381 GACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCAT 78440
|| | ||| || || || ||| || | ||| || || || || || || ||
Sbjct 122726 GAAAGTTGTGCCTGTGGTGTGCCGGCAGCGAAGAGTGTTGGCGAAGCGTGTGTGAAGTAT 122785
Query 78441 TTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500
|| | || | || || ||||| ||||| |||| || || ||| ||||| ||
Sbjct 122786 TTGCCTGACATCAGGTTATATGTCTCAATTGCTGCCTCGATATCCTCGCCGTGAATGCCA 122845
Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAAC 78560
|| ||||||||||| | ||| ||||| || | ||| | || || | |
Sbjct 122846 ACTGCTACACGCATGATCATGTGCTGCGGGCGTTCGCAGATTTTGCCATCGAGGCGGAGA 122905
Query 78561 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAA 78620
| ||||||| ||| | || || ||||| || || | ||| ||||||| |||||
Sbjct 122906 AGGTATGATCGTTCGAGGGTCTTGAAACCGAAGTATTGGTAGTTGAAGTCTCGATCGTAG 122965
Query 78621 ATAATAACAGAATTTAGTT 78639
| |||| | ||||| ||||
Sbjct 122966 ACAATAGCCGAATTGAGTT 122984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694660767892000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |