Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq411 300 2e-76
>seq411
Length=256942
Score = 300 bits (332), Expect = 2e-76
Identities = 1205/1878 (64%), Gaps = 31/1878 (2%)
Strand=Plus/Plus
Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436
|||||||| ||||| | || || | |||| || ||||||||||| ||||| || ||
Sbjct 121118 GTGAACTGGATGGGTGCCGAAGCAGCCATTGTTCGGAGATAGTACATCCCAGTCTTGAGG 121177
Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496
|||| |||| || |||||||| || || | ||| | ||||| ||
Sbjct 121178 CCCAACTTCCAACCTGCAAAATGCATACTGGTGATCTTGCCCATTGTAGGATCCTTCATG 121237
Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556
|| || ||||| || ||| |||||| ||| |||| || | ||| || ||||| | |
Sbjct 121238 TGGATGTTCATTGATTGAGATTGATCAATGTAAGCACCACGATCGGCAGCCATCTGGACG 121297
Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616
||||| |||| |||||||| | || ||| | | ||||| ||| ||||||
Sbjct 121298 ATGGTACGCTGAGAGATTTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCAGCTGGAATG 121357
Query 75617 TTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673
|| | | |||||||| || || ||||| | || ||| ||||||| || | || |
Sbjct 121358 TTAGGAACATTTTGAATCGAACCACCATCTGCGATGATTCTATTCTTCATGTTGTCTGAC 121417
Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733
|| | | | || | | | | | | || || || | ||| || ||||||
Sbjct 121418 CATAGTCCCATATCAACAAGATCCTTCAACAACCATGGGTTGACGACTTGGAACTCTCCA 121477
Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793
| | || | |||| ||| || || ||| ||||| || | |||| ||| ||
Sbjct 121478 GCGAGCACACGACGAGAGTAGATGTTGGAGGTGTATGGCTCGAAGCATTCGTTGAACCCA 121537
Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 75853
| ||||||| || ||||| |||||||| || || | ||||| || | || ||||
Sbjct 121538 AGAATTTGACTGGTACTGGCAGTGGGCATAGGAGCAACAAGCAAACTGTTGCGGATACCA 121597
Query 75854 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCC 75913
| | |||||| | || ||| | | ||||||||| ||||| | ||| ||| ||
Sbjct 121598 TATTGCTTGATTTGTTGCTTCAGAGAATCCCAATCCCAGAGATCAGTTGGAGTGACACCC 121657
Query 75914 CAGAGATCGTATTGTAGAATTCCGTTGCTAGCATAT-GATCCATTATATGTTTCGTAAGT 75972
|| | ||||||||| || || || | || | ||||| | ||||| ||||| |
Sbjct 121658 CACATATCGTATTGAAGCTCACCCTT-CGAGACTGGAGATCCCTCGTATGTCTCGTATGG 121716
Query 75973 CCCGTCCTTTTCAGCTAGTTCGCAACTC--GCCTCTAACGCACCGTAATAAATTGTTTCG 76030
|| ||| | ||| || || ||| || || || ||| || || || ||
Sbjct 121717 TCCAAGCTTCTTAGCGAGATC--AACGGAAGCAGTCAAAGCGGCGTGGTAGATAGTCTCA 121774
Query 76031 AAAATCTTCTTATTAAGAT-CTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAAT 76089
|| |||| | || |||| |||| || ||| | || || || | | | | |
Sbjct 121775 AAGATCTGGATGTTGAGATGCTTG-GCCTCAGGTGACTCGAATGGCAGACGCAGAGCCAA 121833
Query 76090 AAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 76149
|| |||| || || || ||||| |||| | |||||||||| || | ||||| |
Sbjct 121834 GAAGACATCAGCAAGACCTTGAACACCAAGAGCAATAGGTCTGTGACGGAAGTTGGATTT 121893
Query 76150 TTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAAC 76209
| |||||||||| ||||| || || | || || || || || || || |||| ||
Sbjct 121894 CTTTGCTTCTGGAACTGGGTAGTAGTTGACCTCGATGATCTTGTTCAGGTTCTTGACCAC 121953
Query 76210 TACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCACA--AACATA 76267
|| | || || | || || | || ||| | | || | ||| ||| ||
Sbjct 121954 AACCTGGCAGACCTCGTGGAGCTTCTGGAAGTCATAGGTACCGTTGTTCATGTCAACGTA 122013
Query 76268 TT----AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTG 76323
||| || || ||||| | ||||| || ||||||| | || || |
Sbjct 122014 GGTGGGAAGCGCCATGGATGCCAAGTTACAGCAAGCGACCTCATCTGGTGCGGAGTACTC 122073
Query 76324 TATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTT 76383
| ||||| ||||| || || | || || || ||||| | |||||||||||
Sbjct 122074 GACAATCTCAGTGCACAGGTTGGAGCTTCGAATGGTACCGAGATTCTTCTGGTTGCTCTT 122133
Query 76384 TTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGAT 76443
| ||| || | ||||| || || | || || ||||||| || | || | |||||
Sbjct 122134 TCGGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTTCCAGTCTCGGTTTGGGCTTCGAG 122193
Query 76444 AATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTATCGCTT---CTCTCTTT 76499
||| || | ||| | | ||| || || || | ||| | ||| ||| |
Sbjct 122194 AATGGAGTACCAAA-GTTTCTGTGCCTTGATGGTC---TTGCGACCCTTGCCCTCAGCCT 122249
Query 76500 CATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACA 76557
|||| || | ||||| | || || |||||||| || | ||||| | | ||| || ||
Sbjct 122250 CATACTTCTCGTATAGAGCC--TCGAATTCATCACCATAGACATCTGCAAGACCTGGGCA 122307
Query 76558 TTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATC 76617
|| || || ||||||| || ||| |||| | | ||| || ||||| || |||||
Sbjct 122308 CTCGTTGGGGCACATCAGTGTCCATGTGCCATTCTTTTCAACACGCTTCATGAACAGATC 122367
Query 76618 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTT 76677
|| ||||| ||||| || ||||| || | | | |||||| || || ||| ||
Sbjct 122368 TGGGATCCAGAGAGCGTAGAAGAGATCACGAGCGCGAACTTCTTCCTTGCCGTGATTTTT 122427
Query 76678 TTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAAC 76737
| ||||| ||| |||| | || ||| | |||||||| || || || || || | |
Sbjct 122428 TCGGAGATCAAGGTACTCGAAAACATCTGCGTGCCATGGCTCGAGGTAGATGGCGAATGC 122487
Query 76738 ACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAA 76797
||| ||||| || || || ||||| || | ||||||||||||||| || | ||||| |
Sbjct 122488 ACCAGGTCGCTTGTTTCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAACACTCTGAG 122547
Query 76798 CATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACG 76857
||| |||| || ||||| || | || ||||| |||| ||| ||| ||| || ||
Sbjct 122548 CATAGGAACGATACCGTTGGAGTTGCCGTTTGTGCCAGCAATGTAAGCTCCGGTGGCTCG 122607
Query 76858 AATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTT 76917
||| | | | || || || || || || | |||||||| | ||||| ||
Sbjct 122608 AATTCTGTGGACATTGAGACCGATACCACCAGCATTCTTAGAGATCATGGCACAAGTCTT 122667
Query 76918 CAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGA 76977
| ||||| ||||| || || |||||||||||| |||||| || | || || |||
Sbjct 122668 GAGCGTGTCGTAGATACCATCAATACTATCATCCTTCATGTCAATTAAGAAGCACGAAGA 122727
Query 76978 CATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT 77037
| ||| || || || ||| || | ||| || || || || ||||| ||||
Sbjct 122728 AAGTTGTGCCTGTGGTGTGCCGGCAGCGAAGAGTGTTGGCGAAGCGTGTGTGAAGTATTT 122787
Query 77038 TTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTAC 77097
| || | || || ||||| ||||| |||| || |||||| ||||| || ||
Sbjct 122788 GCCTGACATCAGGTTATATGTCTCAATTGCTGCCTCGATATCCTCGCCGTGAATGCCAAC 122847
Query 77098 AGCGACACGCATCAACATATGCTGAGGTCGTTCTACAG-TCTTATTATTTATTTTCAACA 77156
|| |||||||| | ||| ||||| || ||||| ||| | || || | | |
Sbjct 122848 TGCTACACGCATGATCATGTGCTGCGGGCGTTC-GCAGATTTTGCCATCGAGGCGGAGAA 122906
Query 77157 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAA 77216
||||||| ||| | || || ||||| || || | ||| ||||||| ||||| |
Sbjct 122907 GGTATGATCGTTCGAGGGTCTTGAAACCGAAGTATTGGTAGTTGAAGTCTCGATCGTAGA 122966
Query 77217 TAATAACCGAATTTAGTT 77234
|||| ||||||| ||||
Sbjct 122967 CAATAGCCGAATTGAGTT 122984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712926156696000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |