Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq334 86.0 8e-12 >seq334 Length=289943 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 63752 AAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTATGATTTATC 63811 |||| ||||| || ||||||||| | | || |||||||| |||||| | ||| Sbjct 204803 AAATTGGTGACAAGTTTGCTTCTCGTCACGGACAGAAAGGTACTATTGGTATCACTTACA 204862 Query 63812 GACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCATCAATCCAC 63871 || ||||||||||| || || | | || ||||| || |||||| |||||||||| | Sbjct 204863 GAATGGAAGATATGCCGTTCACTCGACAAGGCATCGTTCCTGATCTCATCATCAATCCCC 204922 Query 63872 ACGCTTTTCCCAGTCGTATGAC 63893 | ||| |||| ||||||||| Sbjct 204923 ATGCTATTCCATCTCGTATGAC 204944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667067486943000