Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2965 91.5 3e-13 >seq2965 Length=6591 Score = 91.5 bits (100), Expect = 3e-13 Identities = 173/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446 |||| || || || ||||| | || | |||||| | ||| ||| |||| ||| | Sbjct 6066 TCATCACCGAGGCTGTTGAGATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTGTGCTC 6125 Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || | ||||||||||| ||||| ||| || ||||| || ||||| || || || | Sbjct 6126 TTCTCGGCATGAACGC-CAACTTGATGAAGCAATACATTGAGTTCGTCGCTGATCGGCTC 6184 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | | | || ||| | || || || ||||| | ||||| || | || |||||| Sbjct 6185 CTCCTCTCTCTCGGTAATGAAAAGGTTTACAAGGTTGCCAACCCATTCGACTTCATGGAG 6244 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || || ||||||||||||||||| ||||||||| ||| || || | | Sbjct 6245 AACATCTCTCTCGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCTGATTACCAAAAG 6304 Query 230626 CCTGGTGTGATG 230637 | ||||| ||| Sbjct 6305 GCCGGTGTCATG 6316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057691868195870