Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2965 91.5 3e-13
>seq2965
Length=6591
Score = 91.5 bits (100), Expect = 3e-13
Identities = 173/252 (69%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446
|||| || || || ||||| | || | |||||| | ||| ||| |||| ||| |
Sbjct 6066 TCATCACCGAGGCTGTTGAGATTGAGCAAGAGTTCTTGACTGAGGCTCTTCCTTGTGCTC 6125
Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
|| | ||||||||||| ||||| ||| || ||||| || ||||| || || || |
Sbjct 6126 TTCTCGGCATGAACGC-CAACTTGATGAAGCAATACATTGAGTTCGTCGCTGATCGGCTC 6184
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| | | || ||| | || || || ||||| | ||||| || | || ||||||
Sbjct 6185 CTCCTCTCTCTCGGTAATGAAAAGGTTTACAAGGTTGCCAACCCATTCGACTTCATGGAG 6244
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| || || || ||||||||||||||||| ||||||||| ||| || || | |
Sbjct 6245 AACATCTCTCTCGCCGGAAAGACCAACTTCTTCGAGAAGCGTGTCGCTGATTACCAAAAG 6304
Query 230626 CCTGGTGTGATG 230637
| ||||| |||
Sbjct 6305 GCCGGTGTCATG 6316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057691868195870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |