Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1973 93.3 6e-14
>seq1973
Length=9094
Score = 93.3 bits (102), Expect = 6e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| || || ||||| ||||| || | || |||| |
Sbjct 6136 ATGCAGATCTTCGTTAAGACTCTGACCGGCAAGACTATTACATTGGAAGTTGAGTCTTCG 6195
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| |||||| |||| | || || || || ||||| || ||||| ||||| ||||||
Sbjct 6196 GACACAATTGATAATGTCAAGTCAAAGATCCAGGATAAGGAGGGTATTCCACCGGATCAA 6255
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | | ||||| || || || ||||| |||||| |||| || | || || ||
Sbjct 6256 CAGCGATTGATTTTCGCCGGCAAGCAATTGGAGGATGGTCGTACCCTCAGCGACTACAAC 6315
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGT 124747
|||||||| || ||||||||||||||
Sbjct 6316 ATTCAAAAGGAGAGCACTTTGCATTTGGT 6344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755363938243200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |